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View Structure Prediction Details

Protein: tr|M3WGN1|M3WGN1...
Organism: Felis catus
Length: 192 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tr|M3WGN1|M3WGN1....

Description E-value Query
Range
Subject
Range
gi|60653317 - gi|60653317|gb|AAX29353.1| ribosomal protein L9 [synthetic construct]
2.0E-73 [1..192] [1..192]
RL9_MACFA - 60S ribosomal protein L9 OS=Macaca fascicularis GN=RPL9 PE=2 SV=1
4.0E-73 [1..192] [1..192]
gi|607793, gi|21... - gi|607793|gb|AAB01041.1| ribosomal protein L9, pir||S65792 ribosomal protein L9, cytosolic - human,...
5.0E-73 [1..192] [1..192]
gi|114620151 - gi|114620151|ref|XP_001152896.1| PREDICTED: similar to rat ribosomal protein L9 homologue isoform 2 ...
6.0E-73 [1..192] [1..192]
RL9_BOVIN - 60S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=2 SV=1
9.0E-73 [1..192] [1..192]
RL9_PONPY - 60S ribosomal protein L9 - Pongo pygmaeus (Orangutan)
RL9_PONAB - 60S ribosomal protein L9 OS=Pongo abelii GN=RPL9 PE=2 SV=1
1.0E-72 [1..192] [1..192]
RL9_MOUSE - 60S ribosomal protein L9 OS=Mus musculus GN=Rpl9 PE=1 SV=2
2.0E-72 [1..192] [1..192]
gi|57706 - gi|57706|emb|CAA36002.1| unnamed protein product [Rattus rattus]
RL9_RAT - 60S ribosomal protein L9 OS=Rattus norvegicus GN=Rpl9 PE=1 SV=1
2.0E-72 [1..192] [1..192]

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Predicted Domain #1
Region A:
Residues: [1-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTILSNQTV DIPENVDITL KGRTVIVKGP RGTLRRDFNH INVELSLLGK KKKRLRVDKW  60
   61 WGNRKELATV RTICSHVQNM IKGVTLGFRY KMRSVYAHFP INVVIQENGS LVEIRNFLGE 120
  121 KYIRRVRMRP GVACSVSQAQ KDELILEGND IELVSNSAAL IQQATTVKNK DIRKFLDGIY 180
  181 VSEKGTVQQA DE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.30103
Match: 1s1iH
Description: Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.
Matching Structure (courtesy of the PDB):

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