YRC Public Data Repository - Protein Structure Prediction

Protein:	EG13770
Organism:	Escherichia coli K-12
Length:	172 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EG13770.

Description	E-value	Query Range	Subject Range
gi\|191172872, gi... - gi\|191172872\|ref\|ZP_03034408.1\| acetyltransferase, GNAT family [Escherichia coli F11], gi\|190906878\|... gi\|26108135, gi\|... - gi\|26247733\|ref\|NP_753773.1\| acetyltransferase yncA [Escherichia coli CFT073], gi\|26108135\|gb\|AAN803... gi\|91210691, gi\|... - gi\|91210691\|ref\|YP_540677.1\| acetyltransferase YncA [Escherichia coli UTI89], gi\|91072265\|gb\|ABE0714... gi\|157159424, gi... - gi\|157159424\|ref\|YP_001462722.1\| acetyltransferase [Escherichia coli E24377A], gi\|157081454\|gb\|ABV21... gi\|226900186, gi... - gi\|237705429\|ref\|ZP_04535910.1\| acetyltransferase yncA [Escherichia sp. 3_2_53FAA], gi\|226900186\|gb\|... gi\|227886165, gi... - gi\|227886165\|ref\|ZP_04003970.1\| acetyltransferase yncA [Escherichia coli 83972], gi\|227836830\|gb\|EEJ...	155.0	[0..1]	[172..22]
gi\|75514966 - gi\|75514966\|ref\|ZP_00737170.1\| COG1247: Sortase and related acyltransferases [Escherichia coli 53638...	154.0	[0..1]	[172..1]
gi\|15831306, gi\|... - gi\|15831306\|ref\|NP_310079.1\| putative resistance protein [Escherichia coli O157:H7 str. Sakai], gi\|1... gi\|110343220, gi... - gi\|110641628\|ref\|YP_669358.1\| acetyltransferase YncA [Escherichia coli 536], gi\|110343220\|gb\|ABG6945... gi\|81241135, gi\|... - gi\|82776987\|ref\|YP_403336.1\| putative resistance protein [Shigella dysenteriae Sd197], gi\|81241135\|g... gi\|209911981, gi... - gi\|209918722\|ref\|YP_002292806.1\| putative acetyltransferase [Escherichia coli SE11], gi\|209911981\|db... gi\|115512814, gi... - gi\|117623690\|ref\|YP_852603.1\| acyltransferase [Escherichia coli APEC O1], gi\|115512814\|gb\|ABJ00889.1... gi\|195936939 - gi\|195936939\|ref\|ZP_03082321.1\| acyltransferase [Escherichia coli O157:H7 str. EC4024] gi\|218365147, gi... - gi\|218558378\|ref\|YP_002391291.1\| putative acyltransferase with acyl-CoA N-acyltransferase domain [Es... gi\|215486684, gi... - gi\|215486684\|ref\|YP_002329115.1\| predicted acyltransferase with acyl-CoA N-acyltransferase domain [E... gi\|218704917, gi... - gi\|218704917\|ref\|YP_002412436.1\| putative acyltransferase with acyl-CoA N-acyltransferase domain [Es... gi\|218689376, gi... - gi\|218689376\|ref\|YP_002397588.1\| putative acyltransferase with acyl-CoA N-acyltransferase domain [Es... gi\|25286354, gi\|... - pir\|\|C85733 probable resistance protein Z2271 [imported] - Escherichia coli (strain O157:H7, substra... gi\|15801695, gi\|... - gi\|15801695\|ref\|NP_287713.1\| putative resistance protein [Escherichia coli O157:H7 EDL933], gi\|12515... gi\|254592393, gi... - gi\|254792993\|ref\|YP_003077830.1\| predicted acyltransferase with acyl-CoA N-acyltransferase domain [E... gi\|15831306, gi\|... - gi\|15831306\|ref\|NP_310079.1\| putative resistance protein [Escherichia coli O157:H7], gi\|13361518\|dbj... gi\|83570845 - gi\|83570845\|ref\|ZP_00922287.1\| COG1247: Sortase and related acyltransferases [Shigella dysenteriae 1... gi\|75190496 - gi\|75190496\|ref\|ZP_00703763.1\| COG1247: Sortase and related acyltransferases [Escherichia coli E2437... gi\|75240199 - gi\|75240199\|ref\|ZP_00724151.1\| COG1247: Sortase and related acyltransferases [Escherichia coli F11]	154.0	[0..1]	[172..1]
gi\|56479960, gi\|... - gi\|56479960\|ref\|NP_707633.2\| putative resistance protein [Shigella flexneri 2a str. 301], gi\|5638351... gi\|30063241, gi\|... - gi\|30063241\|ref\|NP_837412.1\| putative resistance protein [Shigella flexneri 2a str. 2457T], gi\|30041...	154.0	[0..1]	[172..1]
gi\|75259565 - gi\|75259565\|ref\|ZP_00730884.1\| COG1247: Sortase and related acyltransferases [Escherichia coli E22]	152.0	[0..1]	[172..1]
gi\|75195557 - gi\|75195557\|ref\|ZP_00705627.1\| COG1247: Sortase and related acyltransferases [Escherichia coli HS] gi\|73855674, gi\|... - gi\|74312197\|ref\|YP_310616.1\| putative resistance protein [Shigella sonnei Ss046], gi\|73855674\|gb\|AAZ... gi\|75231794, gi\|... - gi\|75231794\|ref\|ZP_00718135.1\| COG1247: Sortase and related acyltransferases [Escherichia coli B7A],... gi\|124530764, gi... - gi\|124530764\|ref\|ZP_01701298.1\| GCN5-related N-acetyltransferase [Escherichia coli B], gi\|124498978\|... gi\|170020222, gi... - gi\|170020222\|ref\|YP_001725176.1\| GCN5-related N-acetyltransferase [Escherichia coli ATCC 8739], gi\|1...	152.0	[0..1]	[172..1]
gi\|75239930 - gi\|75239930\|ref\|ZP_00723891.1\| COG1247: Sortase and related acyltransferases [Escherichia coli E1100... gi\|75178570 - gi\|75178570\|ref\|ZP_00698616.1\| COG1247: Sortase and related acyltransferases [Shigella boydii BS512] gi\|83587791 - gi\|83587791\|ref\|ZP_00926417.1\| COG1247: Sortase and related acyltransferases [Escherichia coli 101-1...	152.0	[0..1]	[172..1]
gi\|81245502, gi\|... - gi\|82544091\|ref\|YP_408038.1\| putative resistance protein [Shigella boydii Sb227], gi\|81245502\|gb\|ABB...	152.0	[0..1]	[172..1]
gi\|254703435 - gi\|254703435\|ref\|ZP_05165263.1\| phosphinothricin N-acetyltransferase [Brucella suis bv. 3 str. 686] gi\|23348505, gi\|... - gi\|23502509\|ref\|NP_698636.1\| acetyltransferase [Brucella suis 1330], gi\|23348505\|gb\|AAN30551.1\| acet... gi\|161619584, gi... - gi\|161619584\|ref\|YP_001593471.1\| phosphinothricin N-acetyltransferase [Brucella canis ATCC 23365], g...	150.0	[0..1]	[162..3]
gi\|25286364 - pir\|\|AE3299 phosphinothricin N-acetyltransferase (EC 2.3.1.-) [imported] - Brucella melitensis (stra... gi\|17986662, gi\|... - gi\|17986662\|ref\|NP_539296.1\| phosphinothricin N-acetyltransferase [Brucella melitensis 16M], gi\|1798...	149.0	[0..1]	[162..3]

Back

Predicted Domain #1

Region A:
Residues: [1-172]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIRFARKAD CAAIAEIYNH AVLYTAAIWN DQTVDADNRI AWFEARTLAG YPVLVSEENG  60
   61 VVTGYASFGD WRSFDGFRHT VEHSVYVHPD HQGKGLGRKL LSRLIDEARD CGKHVMVAGI 120
  121 ESQNQASLHL HQSLGFVVTA QMPQVGTKFG RWLDLTFMQL QLDERTEPDA IG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	35.0
Match:	1yr0A
Description:	Crystal structure of phosphinothricin acetyltransferase from agrobacterium tumefaciens
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	2.34977492703662	bayes_pls_golite062009
transferase activity	1.85190002724385	bayes_pls_golite062009
transferase activity, transferring acyl groups	1.75772333794819	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	1.63399963366073	bayes_pls_golite062009
acyltransferase activity	1.60091210227059	bayes_pls_golite062009
N-acyltransferase activity	1.18143103040425	bayes_pls_golite062009
acetyltransferase activity	1.12147423121182	bayes_pls_golite062009
N-acetyltransferase activity	0.796917859235554	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: