YRC Public Data Repository - Protein Structure Prediction

Protein:	FLGB_ECOLI
Organism:	Escherichia coli
Length:	138 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLGB_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|71484066, gi\|... - gi\|71550721\|ref\|ZP_00670810.1\| Flagellar basal body rod protein:Protein of unknown function DUF1078 ...	126.0	[0..5]	[133..1]
gi\|30138210, gi\|... - gi\|30248324\|ref\|NP_840394.1\| flagellar basal body rod protein FlgG [Nitrosomonas europaea ATCC 19718...	126.0	[0..5]	[133..1]
gi\|82410520, gi\|... - gi\|82702455\|ref\|YP_412021.1\| hypothetical protein Nmul_A1326 [Nitrosospira multiformis ATCC 25196], ...	123.0	[0..5]	[133..1]
gi\|7443088 - pir\|\|C70372 flagellar hook basal body protein flgG - Aquifex aeolicus gi\|15606190, gi\|... - gi\|2983377\|gb\|AAC06963.1\| flagellar hook basal-body protein FlgG [Aquifex aeolicus VF5], gi\|15606190...	123.0	[0..5]	[133..1]
gi\|207090416 - gi\|207090416\|gb\|EDZ67687.1\| flagellar basal-body rod protein FlgG [Nitrosococcus oceani AFC27] gi\|254434083, gi... - gi\|254434083\|ref\|ZP_05047591.1\| flagellar basal-body rod protein FlgG [Nitrosococcus oceani AFC27], ... gi\|76884150, gi\|... - gi\|77165836\|ref\|YP_344361.1\| hypothetical protein Noc_2373 [Nitrosococcus oceani ATCC 19707], gi\|768...	123.0	[0..5]	[133..1]
gi\|238719166, gi... - gi\|77960991\|ref\|ZP_00824841.1\| COG4786: Flagellar basal body rod protein [Yersinia mollaretii ATCC 4...	123.0	[0..5]	[133..1]
gi\|58582198, gi\|... - gi\|58582198\|ref\|YP_201214.1\| flagellar biosynthesis cell-distal portion of basal-body rod [Xanthomon...	122.0	[0..5]	[132..81]
gi\|91776311, gi\|... - gi\|91776311\|ref\|YP_546067.1\| flagellar basal-body rod FlgG [Methylobacillus flagellatus KT], gi\|9171...	122.0	[0..5]	[133..1]
gi\|86157777, gi\|... - gi\|86157777\|ref\|YP_464562.1\| flagellar basal-body rod FlgG [Anaeromyxobacter dehalogenans 2CP-C], gi...	122.0	[0..6]	[133..7]
gi\|52007861, gi\|... - gi\|74317650\|ref\|YP_315390.1\| flagellar basal body rod protein FlgG [Thiobacillus denitrificans ATCC ...	121.0	[0..5]	[133..1]

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Predicted Domain #1

Region A:
Residues: [1-138]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDKLDAALR FQQEALNLRA QRQEVLAANI ANADTPGYQA RDIDFASELK KVMQRGRDAT  60
   61 SVVALTMTST QHIPAQALTP PTAELQYRIP DQPSLDGNTV DMDRERTQFA DNSLQYQMSL 120
  121 SALSGQIKGM MNVLQSGN

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits