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View Structure Prediction Details

Protein: acs-1
Organism: Caenorhabditis elegans
Length: 578 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acs-1.

Description E-value Query
Range
Subject
Range
gi|89092350, gi|... - gi|89092350|ref|ZP_01165304.1| acyl-CoA synthase [Oceanospirillum sp. MED92], gi|89083438|gb|EAR6265...
554.0 [0..1] [567..1]

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Predicted Domain #1
Region A:
Residues: [1-578]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAPSRKSYV HGCSTVPLLF ETVGDRLRSA VDQVPDKEFL IFKREGIRKT YSQVATDAEN  60
   61 LACGLLHLGL KKGDRIGIWG PNTYEWTTTQ FASALAGMVL VNINPSYQSE ELRYAIEKVG 120
  121 IRALITPPGF KKSNYYQSIK DILPEVTLKE PGKSGITSRN FTCFQHLIMF DEEDKIYPGA 180
  181 WKYTDVMKMG TEEDRHHLSK IERETQPDDS LNIQYTSGTT GQPKGATLTH HNVLNNAFFV 240
  241 GLRAGYSEKK TIICIPNPLY HCFGCVMGVL AALTHLQTCV FPAPSFDALA ALQAIHEEKC 300
  301 TALYGTPTMF IDMINHPEYA NYNYDSIRSG FIAGAPCPIT LCRRLVQDMH MTDMQVCYGT 360
  361 TETSPVSFMS TRDDPPEQRI KSVGHIMDHL EAAIVDKRNC IVPRGVKGEV IVRGYSVMRC 420
  421 YWNSEEQTKK EITQDRWYHT GDIAVMHDNG TISIVGRSKD MIVRGGENIY PTEVEQFLFK 480
  481 HQSVEDVHIV GVPDERFGEV VCAWVRLHES AEGKTTEEDI KAWCKGKIAH FKIPRYILFK 540
  541 KEYEFPLTVT GKVKKFEIRE MSKIELGLQQ VVSHFSEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 150.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle