Protein: | VRN1_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 341 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VRN1_ARATH.
Description | E-value | Query Range |
Subject Range |
|
230.0 | [0..1] | [341..1] |
|
215.0 | [0..1] | [339..1] |
|
193.0 | [0..3] | [339..18] |
Region A: Residues: [1-122] |
1 11 21 31 41 51 | | | | | | 1 MPRPFFHKLI FSSTIQEKRL RVPDKFVSKF KDELSVAVAL TVPDGHVWRV GLRKADNKIW 60 61 FQDGWQEFVD RYSIRIGYLL IFRYEGNSAF SVYIFNLSHS EINYHSTGLM DSAHNHFKRA 120 121 RL |
Detection Method: | |
Confidence: | 17.0 |
Match: | 1yelA |
Description: | Structure of the hypothetical Arabidopsis thaliana protein At1g16640.1 |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [123-216] |
1 11 21 31 41 51 | | | | | | 1 FEDLEDEDAE VIFPSSVYPS PLPESTVPAN KGYASSAIQT LFTGPVKAEE PTPTPKIPKK 60 61 RGRKKKNADP EEINSSAPRD DDPENRSKFY ESAS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [217-341] |
1 11 21 31 41 51 | | | | | | 1 ARKRTVTAEE RERAINAAKT FEPTNPFFRV VLRPSYLYRG CIMYLPSGFA EKYLSGISGF 60 61 IKVQLAEKQW PVRCLYKAGR AKFSQGWYEF TLENNLGEGD VCVFELLRTR DFVLKVTAFR 120 121 VNEYV |
Detection Method: | |
Confidence: | 20.221849 |
Match: | 1widA |
Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |