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View Structure Prediction Details

Protein: YABQ_BACSU
Organism: Bacillus subtilis subsp. subtilis str. 168
Length: 211 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YABQ_BACSU.

Description E-value Query
Range
Subject
Range
gi|56418589, gi|... - gi|56418589|ref|YP_145907.1| hypothetical protein GK0054 [Geobacillus kaustophilus HTA426], gi|56378...
162.0 [0..1] [196..1]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLTTQFYTM LAMSGMGLWL GASLDTYRLF VIRAKTARWL LFIHDILFWI MQGLLFFYVL  60
   61 LHVNEGEFRI YIFLAVLLGV ATYQSLCKRI YIKILKFVIY LVVSVYQFFK KLIQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 40.21467
Match: PF09578.1
Description: No description for PF09578.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [115-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HVLFRPIVWT CGAIIWLAAF LFKKTYSLIG FLLLCLYKIV MVLCFPIRFI AKQCLKLLPV  60
   61 KMRLTFRRYF EKGAGFLKKK KKLLITIRTT ITRFLKR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle