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View Structure Prediction Details

Protein: gi|115444021, gi...
Organism: Oryza sativa Japonica Group
Length: 240 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115444021, gi....

Description E-value Query
Range
Subject
Range
ATP7_ARATH - Probable ATP synthase 24 kDa subunit, mitochondrial OS=Arabidopsis thaliana GN=At2g21870 PE=1 SV=1
398.0 [0..1] [240..1]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALAARLVSR SRQLYSAQAA LANGGATQVR LYAKEADRTP VNGDDLLKGI FFEVKKKFET  60
   61 ALGVLKKEKI TIDPD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [76-240]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPAAVSRYAQ VMKTVRQKAD LLSDSERIKY TIDTFTKGIP DARTYLNTLQ EIRIKSGLID  60
   61 DMGAEAMMME ALEKVEKEIK KPLLRSDKKN MGLLLAEFEK INKKLGIRKE DLPKIEEELE 120
  121 LEIAKSELTE LKKECVEAME VQLKREEFKD EEMPDVKKLD IRNFL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle