YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|9657489, gi\|1...
Organism:	Vibrio cholerae O1 biovar El Tor str. N16961
Length:	219 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9657489, gi|1....

Description	E-value	Query Range	Subject Range
gi\|229811380, gi... - gi\|229845694\|ref\|ZP_04465817.1\| phosphoglycolate phosphatase [Haemophilus influenzae 6P18H1], gi\|229... gi\|144985848, gi... - gi\|145633479\|ref\|ZP_01789208.1\| phosphoglycolate phosphatase [Haemophilus influenzae 3655], gi\|14498... GPH_HAEI8 - Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain 86-028NP) GN=NTHI0697 PE=3 SV=1	178.0	[0..1]	[215..1]
tr\|A0A085TB38\|A0... - HAD hydrolase, IA, variant 1 family protein OS=Vibrio cholerae GN=DN30_1323 PE=4 SV=1 gi\|75820314, gi\|... - gi\|75820314\|ref\|ZP_00750364.1\| COG0637: Predicted phosphatase/phosphohexomutase [Vibrio cholerae V51...	177.0	[0..4]	[219..1]
gi\|229605202, gi... - gi\|229605202\|ref\|YP_002875906.1\| CbbY family protein [Vibrio cholerae MJ-1236], gi\|229371688\|gb\|ACQ6... gi\|75816249 - gi\|75816249\|ref\|ZP_00746725.1\| COG0637: Predicted phosphatase/phosphohexomutase [Vibrio cholerae V52... gi\|229527913, gi... - gi\|229527913\|ref\|ZP_04417304.1\| CbbY family protein [Vibrio cholerae 12129(1)], gi\|229334275\|gb\|EEN9... tr\|A0A023PTF8\|A0... - Uncharacterized protein OS=Vibrio cholerae PE=4 SV=1 gi\|75830894, gi\|... - gi\|75830894\|ref\|ZP_00760164.1\| COG0637: Predicted phosphatase/phosphohexomutase [Vibrio cholerae MO1... gi\|149740592, gi... - gi\|153825753\|ref\|ZP_01978420.1\| CbbY family protein [Vibrio cholerae MZO-2], gi\|149740592\|gb\|EDM5470... gi\|229506729, gi... - gi\|229506729\|ref\|ZP_04396238.1\| CbbY family protein [Vibrio cholerae BX 330286], gi\|229357080\|gb\|EEO... gi\|116217897, gi... - gi\|75824714\|ref\|ZP_00754161.1\| COG0637: Predicted phosphatase/phosphohexomutase [Vibrio cholerae RC3... gi\|229517392, gi... - gi\|229517392\|ref\|ZP_04406837.1\| CbbY family protein [Vibrio cholerae RC9], gi\|229345428\|gb\|EEO10401.... gi\|75824964 - gi\|75824964\|ref\|ZP_00754400.1\| COG0637: Predicted phosphatase/phosphohexomutase [Vibrio cholerae O39... gi\|229510477, gi... - gi\|229510477\|ref\|ZP_04399957.1\| CbbY family protein [Vibrio cholerae B33], gi\|229352922\|gb\|EEO17862....	177.0	[0..4]	[219..1]
GPH_HAEIN - Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) G... GPH_HAEIN - Phosphoglycolate phosphatase OS=Haemophilus influenzae GN=gph PE=3 SV=1	177.0	[0..1]	[215..1]
gi\|145272121, gi... - gi\|145638526\|ref\|ZP_01794135.1\| phosphoglycolate phosphatase [Haemophilus influenzae PittII], gi\|145... gi\|53733330 - gi\|53733330\|ref\|ZP_00156383.2\| COG0546: Predicted phosphatases [Haemophilus influenzae R2866]	177.0	[0..1]	[215..1]
gi\|241884351, gi... - gi\|241903285\|ref\|ZP_04788011.1\| HAD-superfamily hydrolase, subfamily IA, variant 3 [Thermoanaerobact... gi\|242258243, gi... - gi\|242258243\|ref\|ZP_04803066.1\| HAD-superfamily hydrolase, subfamily IA, variant 3 [Thermoanaerobact... gi\|166853930, gi... - gi\|167039690\|ref\|YP_001662675.1\| HAD family hydrolase [Thermoanaerobacter sp. X514], gi\|166853930\|gb... gi\|76589066, gi\|... - gi\|76795752\|ref\|ZP_00778124.1\| HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hy...	171.0	[0..6]	[216..2]
gi\|42630012 - gi\|42630012\|ref\|ZP_00155557.1\| COG0546: Predicted phosphatases [Haemophilus influenzae R2846]	171.0	[0..1]	[215..1]
gi\|88795676, gi\|... - gi\|88795676\|ref\|ZP_01111369.1\| phosphoglycolate phosphatase [Alteromonas macleodii 'Deep ecotype'], ...	170.0	[0..1]	[214..1]
GPH_VIBPA - Phosphoglycolate phosphatase OS=Vibrio parahaemolyticus GN=gph PE=3 SV=1 GPH_VIBPA - Phosphoglycolate phosphatase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=gph ...	170.0	[0..1]	[216..1]
gi\|32034240 - gi\|32034240\|ref\|ZP_00134451.1\| COG0546: Predicted phosphatases [Actinobacillus pleuropneumoniae sero... gi\|126098145, gi... - gi\|126209353\|ref\|YP_001054578.1\| phosphoglycolate phosphatase [Actinobacillus pleuropneumoniae L20],...	170.0	[0..3]	[216..2]

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Predicted Domain #1

Region A:
Residues: [1-219]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTMNFQAAI FDMDGLLLDT ERVCMRVFQE ACTACGLPFR QEVYLSVIGC NAKTINGILS  60
   61 QAYGEDLPRL HNEWRQRYNA VVMHEAIPHK DGVIALLEWL KARSIPVAVA TSTQKEVALI 120
  121 KLQLAGLDHY FANITTGCEV TQGKPHPEIY LLAAERLGVE PQQCLAFEDS NNGIKAAMAA 180
  181 QMHAFQIPDL VKPSPEVIAL GHPICTSLNE VIDLLSPNH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	37.0
Match:	2pibA
Description:	No description for 2pibA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits