| Protein: | gi|37532712, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 1777 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for gi|37532712, gi|....
|
Region A: Residues: [1-197] |
1 11 21 31 41 51
| | | | | |
1 MAGHPPNHRG EGMIDFVAEL ARMTLVVGYP NAPEYTTIPP LSGELPHRVR LEVHGYVGTC 60
61 LANMAVEASG GTADHACQEA AYLMMARIRE RHDYIFHDTA YRYHPRRAHG DGVSSFRPTA 120
121 GENDTTFGHM CAVMRGLDRM HSDLHKATKA LNDGKLMRIV ALKDEIARLK KENAQLKGLP 180
181 APGGVRIRTT PRKTTTA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [198-296] |
1 11 21 31 41 51
| | | | | |
1 PVRIQLAPRN PPPPAAPAAP SVPPAVPAAP APAPAFTLSF APASAARGSA SGTGGCLFGM 60
61 VYTRNGSRAT GEGSNGEERA DGVHPNSDSG NGPPPLPEN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [297-361] |
1 11 21 31 41 51
| | | | | |
1 PTLAQVMAHQ TQMMAAMMQQ MQQQHQQMHQ RMMQHAEQQH QQFGPPPPQS KLPEFLRVRP 60
61 PTFSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [362-486] |
1 11 21 31 41 51
| | | | | |
1 TTNPMEANDW LHAIEKKLNL LQCNDQEKVA FATHQLQGPA SAWWDNHMAT RPPGTEVTWA 60
61 EFCRSFRKAQ VPDGVVAQKK REFRALHQGN RTVTEYLHEF NRLARYAPED VRTDAEKQEK 120
121 FMAGL
|
| Detection Method: | |
| Confidence: | 34.244125 |
| Match: | PF03732.9 |
| Description: | No description for PF03732.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [487-580] |
1 11 21 31 41 51
| | | | | |
1 DDELTNQLIS GDYADFERLV DKAIRQEDQR NKMDRKRKAA QFRAHQGSHQ RPRFTPGQQG 60
61 GPTTMIVRQH RPFNPSNFHQ GTSGSQNHHG SQPN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [581-824] |
1 11 21 31 41 51
| | | | | |
1 RGAAPRPSVA PAQSGQPAQA KKETGAKPGS CFNCGELGHF ADKCPKPRRA GPRFIQARVN 60
61 HASAEEAQAA PEVVLGTFPV NSIPATVLFD SGATHSFISK KFVGMHGLIR EELSTPMRVH 120
121 TPGNSSTSVQ FSPSITIEIQ RSPFLANLIL LESKDLDVIL GMDWLTKFKG VIDCASRTVT 180
181 LTNEKGETVV YKSLVSPKKG VSLNQIETEI PVDTVEKNLR KLEDIPIVCE YPEVFPEDLT 240
241 TMPP
|
| Detection Method: | |
| Confidence: | 14.0 |
| Match: | 2o40A |
| Description: | No description for 2o40A was found. |
|
Region A: Residues: [825-1352] |
1 11 21 31 41 51
| | | | | |
1 KREIEFRIDL APGTAPIYKR PYRMAANELA EVKKQVDEQL QKGYIRPSTS PWGAPVIFVE 60
61 KKDKTKRMCV DYRALNEVTI KNKYPLPRID DLFDQLKGAK VFSKIDLRSG YHQLRIREED 120
121 IPKTAFTTRY GLYECTVMSF GLTNAPAFFM NLMNKVFMEF LDKFVVVFID DILIYSKSKE 180
181 EHEQHLRLVL EKLKEHQLYA KFSKCDFWLT EVKFLGHVIT AQGVAVDPSN VESVTKWTPP 240
241 KTVSQIRSFL GLAGYYRRFI ENFSRIARPM TQLLKKDEKF KWTAECDKSF EELKKKLVSA 300
301 PVLILPDPTK DFQVYCDASR HGLGCVLMQE GRVVAYASRQ LRPHEGNYPT HDLELAAVVH 360
361 ALKIWRHYLI GNRCEVYTDH KSLKYIFTQP DLNLRQRRWL ELIKDYDMSI HYHPGKANVV 420
421 ADALSRKSYC TALCIEGMCE ELRQEFEHLN MGIVEHGFVA ALEARPTLVD QVRAAQVNDS 480
481 EIAELKKNMR VGKARDFHED EHGTIWMGER LCVPDDKELK DLILTEAH
|
| Detection Method: | |
| Confidence: | 134.0 |
| Match: | 2rf2A |
| Description: | No description for 2rf2A was found. |
|
Region A: Residues: [1353-1698] |
1 11 21 31 41 51
| | | | | |
1 QTQYSIHPGS TKMYQDLKEK FWWVSMRREI AEFVALCDVC QRVKAEHQRP AGLLQPLQIP 60
61 EWKWEEIGMD FITGLPRTSS GHDSIWVVVD RLTKVAHFIP VHTTYTGKRL AELYLSRIMC 120
121 LHGVPKKIVS DRGSQFTSKF WQKLQEEMGT RLNFSTAYHP QTDGQTERVN QILEDMLRAC 180
181 ALDFGGAWDK SLPYAEFSYN NSYQASLQMA PFEALYGRKC RTPLFWDQTG ERQLFGTKVL 240
241 AEAEEKVRII RERLRIAQSR QKSYADNRRR ELTFEAGDYV YLRVTPLRGV HRFQTKGKLA 300
301 PRFVGPYKIL ERRGEVAYQL ELPSNMIGIH DVFHVSQLKK CLRVPE
|
| Detection Method: | |
| Confidence: | 60.69897 |
| Match: | 1k6yA |
| Description: | N-terminal Zn binding domain of HIV integrase; Retroviral integrase, catalytic domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1699-1777] |
1 11 21 31 41 51
| | | | | |
1 EQADSEHIDI QEDLTYVEKP VRILDTSERR TRNKVTRFCR VQWSHHSEEE ATWEREDELK 60
61 AAHPHLFTSS SESRGRDSV
|
| Detection Method: | |
| Confidence: | 12.036212 |
| Match: | PF00385.16 |
| Description: | No description for PF00385.16 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
