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View Structure Prediction Details

Protein: gi|113534153, gi...
Organism: Oryza sativa Japonica Group
Length: 260 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113534153, gi....

Description E-value Query
Range
Subject
Range
gi|109016494 - gi|109016494|ref|XP_001106777.1| PREDICTED: similar to LAG1 longevity assurance homolog 2 isoform 1 ...
216.0 [0..28] [258..387]

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Predicted Domain #1
Region A:
Residues: [1-87]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGNFGSEER ILWPASVLAG IAMCAAVYDI TQKVSSHCFK GYDNISPMKK VEWNNRGFST  60
   61 FHALVAAVVS FYLVVISDLF HSNIIID

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [88-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RNSWLSDAMF GVSIGYFLTD LVMILWYFPS LGGKEYLLHH GLSMYAICLA LLSGKAHMYI  60
   61 LMVLFTEATT PFVNLRWYLE VAGKKTHNLY LYNGLALFVG WLVARVILFI YFFTHMYFHF 120
  121 DQVKSIFPLG FYSILTVPPA LAVMNLFWFW KIFKGMLKTL SKRRQQSENG KAE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle