YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|12313686, gi|...
Organism: Oryza sativa Japonica Group
Length: 812 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|12313686, gi|....

Predicted Domain #1
Region A:
Residues: [1-812]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHGSIIASA VGVGVGVGVG IGLVSSRLTG LATGGGATAA EVEAELRCLV VDGRDVGVSF  60
   61 DDFPYYLSEQ SKLALTSTAF VHLSPTILPN HIRVLSASSR TILLCGPSEA YLQSLAKALA 120
  121 NQFSARLLLL DVIDFACKLH HKYGGPSNTQ TRERSMTEAA FDRVSSLVGA FNLFRKKEEP 180
  181 TGTGPLSRET GILDLRTSTC CPHNTPSVRV QLSLVPPEKD HDPESSKYLA SVKPCWSLNE 240
  241 KVLIQSLYKI IVSASEISPV ILYIRDVDDL LGSSEKAYCM FQKMLKKLSG RVIVIGSQFL 300
  301 DDDEDREDIE ESVCALFPCI LETKPPKDKV LLEKWKTQME EDSNNNNNQV VQNYIAEVLA 360
  361 ENNLECEDLS SINADDDCKI IVAYLEEIIT PSVSYHLMNN KNPKYRNGNL VISSESLSHG 420
  421 LRIFQESNDL GKDTVEAKDE TEMVVPDNEY EKKIRPTVIP ANEIGVTFDD IGALADIKEC 480
  481 LHELVMLPLQ RPDFFKGGLL KPCKGVLLFG PPGTGKTMLA KALANAAGAS FLNISMASMT 540
  541 SKWYGESEKC IQALFSLAAK LAPAIIFIDE VDSMLGKRDN HSENEASRRV KNEFMAHWDG 600
  601 LLSKSNERIL VLAATNRPFD LDDAVIRRFE HRIMVGLPTL ESRELILKTL LSKETVENID 660
  661 FKELAKMTEG YTSSDLKNIC VTAAYHPVRE LLQKEKNKVK KETAPETKQE PKEKTKIQEN 720
  721 GTKSSDSKTE KDKLDNKEGK KDKPADKKDK SDKGDAGETT LRPLNMEDLR KAKDEVAASF 780
  781 ASEGVVMNQI KEWNELYGKG GSRKREQLTY FL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 123.0
Match: 1oz4A
Description: VCP/p97
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle