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View Structure Prediction Details

Protein: gi|215686787, gi...
Organism: Oryza sativa Japonica Group
Length: 475 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215686787, gi....

Description E-value Query
Range
Subject
Range
gi|114675079 - gi|114675079|ref|XP_512338.2| PREDICTED: translocase of inner mitochondrial membrane 44 [Pan troglod...
304.0 [0..28] [475..291]

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Predicted Domain #1
Region A:
Residues: [1-378]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSALLRAL RRPSSEAALR LAASVRVQGV TGYRHLNNRN LSVFNEFSKQ LKGEAKSNPE  60
   61 FQKSMKEFSE KLSGVKEDLK VRTKQTAETI YKSVDDVLTE AEATSKKVTA NVKEKMSAAT 120
  121 EEVKESFRLG KEDTSSCKDG SPETSKHEYS ETSSHSDDKS QAGTSGYTLF NKLRSTLSSA 180
  181 SPVLSGAFAK LRDTRVSTYA KQGYEIFKDE LSSSSSRKKR NHARHASAGT VEKSTRTELV 240
  241 IVPTKKSVLG EKWEAFKNKM RGHPAYKRVN EYTKPVVNIG QEVAEDVRER WETSDNPVVQ 300
  301 KIQDLNESIF EETATAVSFR EIRQRDPSFS LPDFAGDVQE MIKPVLTAYS KGDVKTLKKY 360
  361 CTKEVIERCK GERDAYAS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.0
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [379-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGIFFDHKIL HISDADVRET KMMGSTPIII VGFQTQQIYC VRDREGQVTE GGQDTIQTVF  60
   61 YAWAMQLMDS DEVPEEESYY PVWRLREIQQ VGIKALI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.154902
Match: 2cw9A
Description: Crystal structure of human Tim44 C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle