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View Structure Prediction Details

Protein: gi|50509308, gi|...
Organism: Oryza sativa Japonica Group
Length: 1023 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|50509308, gi|....

Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLHYHHLAV VLLAAVAAAA TAAAGGEADA LLAVKAALDD PTGALASWTT NTTSSPCAWS  60
   61 GVACNARGAV VGLDVS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [77-509]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRNLTGGLPG AALSGLQHLA RLDLAANALS GPIPAALSRL APFLTHLNLS NNGLNGTFPP  60
   61 QLSRLRALRV LDLYNNNLTG ALPLEVVSMA QLRHLHLGGN FFSGGIPPEY GRWGRLQYLA 120
  121 VSGNELSGKI PPELGNLTSL RELYIGYFNS YSGGIPPELG NMTDLVRLDA ANCGLSGEIP 180
  181 PELGNLANLD TLFLQVNGLA GGIPRELGKL ASLSSLDLSN NALAGEIPAT FADLKNLTLL 240
  241 NLFRNKLRGD IPEFVGDLPS LEVLQLWENN FTGGIPRRLG RNGRFQLLDL SSNRLTGTLP 300
  301 PDLCAGGKLE TLIALGNSLF GAIPASLGKC TSLTRVRLGD NYLNGSIPEG LFELPNLTQV 360
  361 ELQDNLISGG FPAVSGTGAP NLGQISLSNN QLTGALPAFI GSFSGVQKLL LDQNAFTGEI 420
  421 PPEIGRLQQL SKA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.221849
Match: 2omuA
Description: No description for 2omuA was found.

Predicted Domain #3
Region A:
Residues: [510-695]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLSGNSFDGG VPPEIGKCRL LTYLDLSRNN LSGEIPPAIS GMRILNYLNL SRNQLDGEIP  60
   61 ATIAAMQSLT AVDFSYNNLS GLVPATGQFS YFNATSFVGN PGLCGPYLGP CHPGAPGTDH 120
  121 GGRSHGGLSN SFKLLIVLGL LALSIAFAAM AILKARSLKK ASEARAWKLT AFQRLEFTCD 180
  181 DVLDSL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [696-1023]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KEENIIGKGG AGTVYKGTMP DGEHVAVKRL PAMSRGSSHD HGFSAEIQTL GRIRHRYIVR  60
   61 LLGFCSNNET NLLVYEYMPN GSLGELLHGK KGGHLHWDTR YKVAVEAAKG LCYLHHDCSP 120
  121 PILHRDVKSN NILLDSDFEA HVADFGLAKF LQDSGTSECM SAIAGSYGYI APEYAYTLKV 180
  181 DEKSDVYSFG VVLLELITGK KPVGEFGDGV DIVQWVKTMT DSNKEHVIKI LDPRLSTVPV 240
  241 HEVMHVFYVA LLCVEEQSVQ RPTMREVVQI LSELPKPTSK QGEEPPSGEG AVFDLVVPAE 300
  301 SAEANEAKEQ QQQQLNSPSS PPPDLISI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.30103
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle