YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|15900190, gi\|...
Organism:	Streptococcus pneumoniae TIGR4
Length:	231 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15900190, gi|....

Description	E-value	Query Range	Subject Range
gi\|77970064, gi\|... - gi\|78062179\|ref\|YP_372087.1\| GCN5-related N-acetyltransferase [Burkholderia sp. 383], gi\|77970064\|gb...	187.0	[0..3]	[231..19]
gi\|84354578 - gi\|84354578\|ref\|ZP_00979481.1\| COG1670: Acetyltransferases, including N-acetylases of ribosomal prot...	185.0	[0..1]	[231..1]
gi\|67099736, gi\|... - gi\|67666724\|ref\|ZP_00463966.1\| GCN5-related N-acetyltransferase [Burkholderia cenocepacia HI2424], g... gi\|67094672, gi\|... - gi\|67657618\|ref\|ZP_00454995.1\| GCN5-related N-acetyltransferase [Burkholderia cenocepacia AU 1054], ...	184.0	[0..3]	[231..19]
gi\|67548654, gi\|... - gi\|67548654\|ref\|ZP_00426538.1\| GCN5-related N-acetyltransferase [Burkholderia vietnamiensis G4], gi\|...	183.0	[0..2]	[231..65]
gi\|115358701, gi... - gi\|115358701\|ref\|YP_775839.1\| GCN5-related N-acetyltransferase [Burkholderia ambifaria AMMD], gi\|115...	183.0	[0..3]	[231..19]
gi\|25508126 - pir\|\|D97901 conserved hypothetical protein spr0236 [imported] - Streptococcus pneumoniae (strain R6) gi\|15902280, gi\|... - gi\|15902280\|ref\|NP_357830.1\| hypothetical protein spr0236 [Streptococcus pneumoniae R6], gi\|15457783... gi\|116076468, gi... - gi\|116515892\|ref\|YP_815757.1\| acetyltransferase, GNAT family protein [Streptococcus pneumoniae D39],...	182.0	[0..1]	[231..1]
gi\|24377226, gi\|... - gi\|24379305\|ref\|NP_721260.1\| hypothetical protein SMU.850 [Streptococcus mutans UA159], gi\|24377226\|... gi\|254997590 - gi\|254997590\|dbj\|BAH88191.1\| hypothetical protein [Streptococcus mutans NN2025]	181.0	[0..1]	[230..1]
gi\|150840040, gi... - gi\|75429725\|ref\|ZP_00732387.1\| conserved hypothetical protein [Actinobacillus succinogenes 130Z], gi...	180.0	[0..1]	[230..1]
gi\|23094673, gi\|... - gi\|25010321\|ref\|NP_734716.1\| GNAT family acetyltransferase [Streptococcus agalactiae NEM316], gi\|230...	179.0	[0..1]	[231..1]
gi\|45656535, gi\|... - gi\|45656535\|ref\|YP_000621.1\| ribosomal protein serine acetyltransferase [Leptospira interrogans sero... gi\|24197520, gi\|... - gi\|24216256\|ref\|NP_713737.1\| acetyltransferase [Leptospira interrogans serovar Lai str. 56601], gi\|2...	179.0	[0..3]	[231..25]

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Predicted Domain #1

Region A:
Residues: [1-231]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVNEYGQMI GESMEAYTPG ELPSFDFLEG RYARIEALSV EKHAEDLLAV YGPDTPREMW  60
   61 TYLFQESVAD MEELVSLLNQ MLARKDRFYY AIIDKATGKA LGTFSLMRID QNNRVIEVGA 120
  121 VTFSPELRGT RIGTEAQYLL ACYVFEELNY RRYEWKCDAL NLPSRRAAER LGFIYEGTFR 180
  181 QAVVYKGRTR DTDWLSMIDK DWPQVKARLE IWLRPENFDK NGRQHKSLRE L

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Detection Method:	PSI-BLAST
Confidence:	26.69897
Match:	1nslA
Description:	Probable acetyltransferase YdaF
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.97933499002461	bayes_pls_golite062009
transferase activity	1.72447231774431	bayes_pls_golite062009
transferase activity, transferring acyl groups	1.42711272311757	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	1.24328242407788	bayes_pls_golite062009
acyltransferase activity	1.2338745976101	bayes_pls_golite062009
N-acyltransferase activity	0.890897647236405	bayes_pls_golite062009
acetyltransferase activity	0.823367673029436	bayes_pls_golite062009
N-acetyltransferase activity	0.498634717186713	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: