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View Structure Prediction Details

Protein: FRDA_ARATH
Organism: Arabidopsis thaliana
Length: 187 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FRDA_ARATH.

Description E-value Query
Range
Subject
Range
FRDA_MOUSE - Frataxin, mitochondrial OS=Mus musculus GN=Fxn PE=1 SV=1
217.0 [0..2] [187..15]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATASRFLLR KLPRFLKLSP TLLRSNGVRV SSNLIQDSIE PLDSFWRIGS RIRHDSLTTR  60
   61 SFSSQGPASV DYSSV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [76-187]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQEEEFHKLA NFTINHLLEK IEDYGDNVQI DGFDIDYGNE VLTLKLGSLG TYVLNKQTPN  60
   61 RQIWMSSPVS GPSRFDWDRD ANAWIYRRTE AKLHKLLEEE LENLCGEPIQ LS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.0
Match: 1ekgA
Description: C-terminal domain of frataxin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle