YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260182, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	255 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260182, gi|....

Description	E-value	Query Range	Subject Range
gi\|42784682, gi\|... - gi\|42784682\|ref\|NP_981929.1\| OxaA-like protein precursor [Bacillus cereus ATCC 10987], gi\|42740614\|g...	1.0E-71	[1..255]	[1..255]
gi\|152977685, gi... - gi\|89202813\|ref\|ZP_01181521.1\| 60 kDa inner membrane insertion protein [Bacillus cereus subsp. cytot...	3.0E-71	[1..255]	[1..255]
gi\|91798521, gi\|... - gi\|92115431\|ref\|YP_575359.1\| putative inner membrane protein translocase component YidC [Chromohalob...	3.0E-71	[35..255]	[358..572]
gi\|228652749, gi... - gi\|229130732\|ref\|ZP_04259685.1\| Membrane protein oxaA 1 [Bacillus cereus BDRD-Cer4], gi\|228652749\|gb... YIDC2_BACCR - Membrane protein insertase YidC 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 1...	4.0E-71	[1..252]	[1..252]
gi\|84318222 - gi\|84318222\|ref\|ZP_00966649.1\| COG0706: Preprotein translocase subunit YidC [Pseudomonas aeruginosa ...	2.0E-70	[12..251]	[331..571]
YIDC_SALPA, OXAA... - Membrane protein insertase YidC OS=Salmonella paratyphi A GN=yidC PE=3 SV=1, Inner membrane protein ... YIDC_SALPK - Membrane protein insertase YidC OS=Salmonella paratyphi A (strain AKU_12601) GN=yidC PE=3 SV=1 YIDC_SALPA - Membrane protein insertase YidC OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=yidC PE=3 S... YIDC_SALA4 - Membrane protein insertase YidC OS=Salmonella agona (strain SL483) GN=yidC PE=3 SV=1 gi\|194468665, gi... - gi\|194468665\|ref\|ZP_03074649.1\| inner membrane protein OxaA [Salmonella enterica subsp. enterica ser... gi\|195632342, gi... - gi\|195632342\|gb\|EDX50826.1\| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar... gi\|205331641, gi... - gi\|205331641\|gb\|EDZ18405.1\| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar... YIDC_SALPB - Membrane protein insertase YidC OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=yidC PE=3... gi\|238913094 - gi\|238913094\|ref\|ZP_04656931.1\| putative inner membrane protein translocase component YidC [Salmonel... OXAA_SALPB - Inner membrane protein oxaA OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=oxaA PE=3 SV=...	3.0E-70	[22..255]	[318..546]
YIDC_SALCH - Membrane protein insertase YidC OS=Salmonella choleraesuis (strain SC-B67) GN=yidC PE=3 SV=1 OXAA_SALCH - Inner membrane protein oxaA OS=Salmonella choleraesuis GN=oxaA PE=3 SV=1 OXAA_SALCH, YIDC... - Membrane protein insertase YidC OS=Salmonella choleraesuis GN=yidC PE=3 SV=1, Inner membrane protein...	3.0E-70	[22..255]	[318..546]
OXAA_SALTI - Inner membrane protein oxaA OS=Salmonella typhi GN=oxaA PE=3 SV=1 gi\|16762484 - gi\|16762484\|ref\|NP_458101.1\| putative inner membrane protein translocase component YidC [Salmonella ... YIDC_SALTI - Membrane protein insertase YidC OS=Salmonella typhi GN=yidC PE=3 SV=1 gi\|29139608, gi\|... - gi\|29143972\|ref\|NP_807314.1\| putative inner membrane protein translocase component YidC [Salmonella ... gi\|213052693 - gi\|213052693\|ref\|ZP_03345571.1\| putative inner membrane protein translocase component YidC [Salmonel... gi\|213424948 - gi\|213424948\|ref\|ZP_03357698.1\| putative inner membrane protein translocase component YidC [Salmonel...	3.0E-70	[22..255]	[318..546]
YIDC_PSEA7 - Membrane protein insertase YidC OS=Pseudomonas aeruginosa (strain PA7) GN=yidC PE=3 SV=1	3.0E-70	[9..251]	[335..578]
gi\|168260373, gi... - gi\|205350262\|gb\|EDZ36893.1\| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar... OXAA_SALTY - Inner membrane protein oxaA OS=Salmonella typhimurium GN=oxaA PE=3 SV=1 gi\|167548869, gi... - gi\|205325671\|gb\|EDZ13510.1\| inner membrane protein OxaA [Salmonella enterica subsp. enterica serovar... YIDC_SALTY - Membrane protein insertase YidC OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=y... gi\|200387745, gi... - gi\|200387745\|ref\|ZP_03214357.1\| inner membrane protein OxaA [Salmonella enterica subsp. enterica ser... gi\|197243487, gi... - gi\|197265232\|ref\|ZP_03165306.1\| inner membrane protein OxaA [Salmonella enterica subsp. enterica ser... OXAA_SALTY, YIDC... - Membrane protein insertase YidC OS=Salmonella typhimurium GN=yidC PE=3 SV=1, Inner membrane protein ... lcl\|NC_016856.1_... - [gene=yidC] [protein=putative inner membrane protein translocase component YidC] [protein_id=YP_0052...	3.0E-70	[22..255]	[318..546]

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Predicted Domain #1

Region A:
Residues: [1-255]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKLGLLAM VVALMAITAG CSEVNQPITP KSTGIWNEYF VYPLSQLITY FANLFGSNYG  60
   61 LAIVVTTLII RFALLPLMIK QTKSTKAMQA LQPEMVKLKE KYSSKDQATQ QKLQQEMMQL 120
  121 YQKNGVNPLA GCLPIFVQMP ILFAFYHAIM RTSEISKHTF LWFDLGQADP YYILPVVAAI 180
  181 TTFIQQKLAM AGTAGQNPQM AMMLWLMPIM ILIFAINFPA ALSLYWVVGN IFGIAQMYLI 240
  241 KGPEIKASKA GGSSK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	97.420216
Match:	PF02096.11
Description:	No description for PF02096.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits