YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30253599, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	485 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30253599, gi|....

Description	E-value	Query Range	Subject Range
SYE_ENTFA - Glutamate--tRNA ligase OS=Enterococcus faecalis (strain ATCC 700802 / V583) GN=gltX PE=3 SV=1 SYE_ENTFA - Glutamate--tRNA ligase OS=Enterococcus faecalis GN=gltX PE=3 SV=1	0.0	[2..484]	[1..485]
gi\|68195746, gi\|... - gi\|69245495\|ref\|ZP_00603459.1\| Glutamyl-tRNA synthetase bacterial/mitochondrial [Enterococcus faeciu... gi\|48825607 - ref\|ZP_00286850.1\| COG0008: Glutamyl- and glutaminyl-tRNA synthetases [Enterococcus faecium]	0.0	[2..484]	[1..485]
SYE_GEOKA - Glutamyl-tRNA synthetase OS=Geobacillus kaustophilus GN=gltX PE=3 SV=1 SYE_GEOKA - Glutamate--tRNA ligase OS=Geobacillus kaustophilus (strain HTA426) GN=gltX PE=3 SV=1	0.0	[1..484]	[1..486]
SYE_BACLD - Glutamate--tRNA ligase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200...	0.0	[1..480]	[1..480]
gi\|221312224 - gi\|221312224\|ref\|ZP_03594029.1\| glutamyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCI... SYE_BACSU - Glutamate--tRNA ligase OS=Bacillus subtilis GN=gltX PE=3 SV=1 gi\|221321421 - gi\|221321421\|ref\|ZP_03602715.1\| glutamyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY... gi\|221317158 - gi\|221317158\|ref\|ZP_03598452.1\| glutamyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. JH6... SYE_BACSU - Glutamate--tRNA ligase OS=Bacillus subtilis (strain 168) GN=gltX PE=3 SV=1	0.0	[1..482]	[1..482]
SYE_EXIS2 - Glutamate--tRNA ligase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=gltX ...	0.0	[2..481]	[1..480]
SYE_GEOSE - Glutamate--tRNA ligase OS=Geobacillus stearothermophilus GN=gltX PE=3 SV=1	0.0	[1..484]	[1..485]
SYE_BACHD - Glutamyl-tRNA synthetase OS=Bacillus halodurans GN=gltX PE=3 SV=1 SYE_BACHD - Glutamate--tRNA ligase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 915...	0.0	[1..484]	[1..484]
SYE_STAS1 - Glutamate--tRNA ligase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM...	0.0	[1..482]	[1..482]
SYE_BACCN - Glutamate--tRNA ligase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98)...	0.0	[1..485]	[1..485]

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Predicted Domain #1

Region A:
Residues: [1-485]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKQVRVRYA PSPTGHLHIG NARTALFNYL FARHQDGKFI IRIEDTDVKR NVAGGEESQL  60
   61 KYLKWLGMDW DEGVDVGGEF GPYRQTERLD IYKKLYEDLL ERGLAYKCYM TEEELEAERE 120
  121 GQIARGETPR YAGNHRDLTE AQVKEFEAEG RIPSIRFRVP ADRDYTFKDI VKDEVAFHSN 180
  181 DFGDFVIVKK DGIPTYNFAV AVDDHLMEIT HVLRGDDHIS NTPKQMMIYE AFGWDIPQFG 240
  241 HMTLIVNESR KKLSKRDESI IQFIEQYKEL GYLPEAIFNF IALLGWSPVG EEEIFSQEEF 300
  301 IKMFDAARLS KSPALFDSQK LKWMNNQYMK KQDLDTVVEL SLPHLVKAGR IGETLSEQEQ 360
  361 AWIRDVIALY HEQMSFGAEI VELSEMFFKD HVDYEEEGQE VLKGEQVPEV LRAFAGQVEA 420
  421 LEAMEPAAIK AAIKAVQKET GHKGKNLFMP IRVATTGQTH GPELPNAIAL LGKEKVLNRL 480
  481 QKVIG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	117.0
Match:	2cfoA
Description:	No description for 2cfoA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits