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View Structure Prediction Details

Protein: gi|30260502, gi|...
Organism: Bacillus anthracis str. Ames
Length: 398 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260502, gi|....

Description E-value Query
Range
Subject
Range
gi|50752715 - gi|50752715|ref|XP_413724.1| PREDICTED: similar to Na+-dependent purine-selective nucleoside transpo...
0.0 [2..397] [785..1198]
S28A2_MOUSE - Sodium/nucleoside cotransporter 2 OS=Mus musculus GN=Slc28a2 PE=1 SV=2
0.0 [2..397] [174..587]
gi|15721849 - gi|15721849|gb|AAK38150.1| concentrative Na+ nucleoside cotransporter [Rattus norvegicus]
0.0 [2..397] [173..586]
gi|50418042, gi|... - gi|50418042|gb|AAH77436.1| Slc28a2-prov protein [Xenopus laevis], gi|148225855|ref|NP_001086782.1| s...
0.0 [2..397] [156..569]
S28A1_RABIT - Sodium/nucleoside cotransporter 1 OS=Oryctolagus cuniculus GN=SLC28A1 PE=2 SV=1
0.0 [2..397] [172..585]
SLC28A1 - solute carrier family 28 (sodium-coupled nucleoside transporter), member 1
0.0 [2..397] [177..590]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYVMSIIGI LVVLGLCFAL SNNKSKINFR AIAIMIGFQI LIGWFMFGTK IGQQIIIFIS  60
   61 KVFNKLIKLG TTGVDFLFNG IQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 30.657577
Match: PF01773.11
Description: No description for PF01773.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [83-228]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RDFVFFLNVL LIIVFFSALL SIFSYLGVLP FIVRVVGGAI SKVTGLPRVE SFHAVNSVFF  60
   61 GSSEALIVIK NDLQHFNKNR MFIICCSAMS SVSASVTASY VMMLDAKYVL AALPLNLFSS 120
  121 LIVCSLLTPV DTKKEDEVVQ KFDRTV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 13.040959
Match: PF07670.5
Description: No description for PF07670.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [229-398]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGDSFIGAMI NGALDGLKVA GIVAALMIAF IGVMEVVNYV ISAASGAMGH AVTLQQIFGY  60
   61 VLAPFAFLMG IPAQDIIPAG GIMGTKIVLN EFVAILDLKG VAATLSPRTV GIVTVFLISF 120
  121 ASISQIGAIV GTIRALSEKQ GSIVSKFGWK MLFASTLASI LSATIAGLFI 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle