YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|30254344, gi|...
Organism: Bacillus anthracis str. Ames
Length: 433 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30254344, gi|....

Description E-value Query
Range
Subject
Range
gi|67535384, gi|... - gi|67543205|ref|ZP_00421138.1| Xanthine/uracil/vitamin C permease [Burkholderia vietnamiensis G4], g...
2.0E-62 [2..431] [143..565]
gi|113531013, gi... - gi|116696514|ref|YP_842090.1| major facilitator superfamily transporter AzgA family protein [Ralston...
3.0E-58 [1..432] [32..456]
gi|94314734, gi|... - gi|94314734|ref|YP_587943.1| xanthine/uracil/vitamin C permease [Ralstonia metallidurans CH34], gi|9...
8.0E-58 [1..432] [27..451]
gi|72122498, gi|... - gi|73539161|ref|YP_299528.1| xanthine/uracil/vitamin C permease:sulphate transporter [Ralstonia eutr...
1.0E-56 [1..432] [27..451]
gi|89087528, gi|... - gi|89097669|ref|ZP_01170557.1| YtiP [Bacillus sp. NRRL B-14911], gi|89087528|gb|EAR66641.1| YtiP [Ba...
3.0E-56 [1..433] [1..433]
gi|62129968, gi|... - gi|62182335|ref|YP_218752.1| xanthine/uracil permease family protein [Salmonella enterica subsp. ent...
8.0E-55 [1..431] [60..484]
gi|16504783, gi|... - gi|25309459|pir||AH0956 probable membrane transport protein STY3932 [imported] - Salmonella enterica...
gi|29143966, gi|... - gi|29143966|ref|NP_807308.1| putative membrane transport protein [Salmonella enterica subsp. enteric...
gi|16762478 - gi|16762478|ref|NP_458095.1| putative membrane transport protein [Salmonella enterica subsp. enteric...
1.0E-54 [1..431] [60..484]
gi|16422424 - gi|16422424|gb|AAL22709.1| putative xanthine/uracil permeases family [Salmonella enterica subsp. ent...
gi|56415721, gi|... - gi|56415721|ref|YP_152796.1| putative membrane transport protein [Salmonella enterica subsp. enteric...
gi|197364649, gi... - gi|197364649|ref|YP_002144286.1| putative membrane transport protein [Salmonella enterica subsp. ent...
1.0E-54 [1..431] [60..484]
gi|11279010 - pir||D81776 conserved hypothetical protein NMA2056 [imported] - Neisseria meningitidis (strain Z2491...
gi|15794934, gi|... - gi|7380684|emb|CAB85274.1| conserved hypothetical protein [Neisseria meningitidis Z2491], gi|2187688...
2.0E-54 [1..431] [12..435]
gi|19743668 - gi|19743668|gb|AAL92573.1| putative xanthine/uracil permease [Delftia acidovorans]
2.0E-54 [1..431] [7..430]

Back

Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNLSKHKTS IKTEIMAGII TFLTMAYIIV VNPVILGDAG VPFEQAFTAT IIAAVVGTLF  60
   61 MAIFTNLPIA IAPGMGLNAY FSYSVVKAHE GMTFAIAFSA VFVAGMILIL LSFTSFRTKL 120
  121 MEAIPENLKH AITAGIGLFI AFIGLRLTGI VTKNEANLVG LGDL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [165-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HSAPVLLALA GLGITIVLMS LNVNGALFIG MLLTGIIAFF TGQLTFSNGV TSMPGLPEGI  60
   61 IVSNPITAVS DVINYGLYGV VFSFFLVTLF DTTGTLLGVA QQGGFMKDG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [274-433]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLPKAGRALL SDSFSATIGS MFGTTPSTAY IESSAGVAAG GRTGLTTVTV AVLFALAAFF  60
   61 GPLVSAVSGV SAITAPSLII VGSLMMGSVR HIDWDAFDEA FPAFLVILSM PLTSSIATGI 120
  121 ALGFISYPLM KVAKGKFRAV HPLVYVFGIL FAYQLIFLPH 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle