YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30254869, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	68 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30254869, gi|....

Description	E-value	Query Range	Subject Range
gi\|7475084 - gi\|7475084\|pir\|\|G69836 hypothetical protein yisG - Bacillus subtilis gi\|16078135, gi\|... - gi\|2633407\|emb\|CAB12911.1\| spore germination protein [Bacillus subtilis subsp. subtilis str. 168], g...	106.0	[0..1]	[68..4]
GEPB_BACSU, GERP... - Probable spore germination protein gerPB OS=Bacillus subtilis GN=gerPB PE=1 SV=3, (O06720) Probable ... gi\|221313233 - gi\|221313233\|ref\|ZP_03595038.1\| spore germination protein [Bacillus subtilis subsp. subtilis str. NC... GERPB_BACSU - Probable spore germination protein GerPB OS=Bacillus subtilis (strain 168) GN=gerPB PE=1 SV=3 gi\|221322431 - gi\|221322431\|ref\|ZP_03603725.1\| spore germination protein [Bacillus subtilis subsp. subtilis str. SM... gi\|221318156 - gi\|221318156\|ref\|ZP_03599450.1\| spore germination protein [Bacillus subtilis subsp. subtilis str. JH...	103.0	[0..1]	[68..1]
gi\|228984317, gi... - gi\|228984317\|ref\|ZP_04144498.1\| hypothetical protein bthur0001_10240 [Bacillus thuringiensis serovar... gi\|229028917, gi... - gi\|229028917\|ref\|ZP_04185018.1\| hypothetical protein bcere0028_10210 [Bacillus cereus AH1271], gi\|22... gi\|229137935, gi... - gi\|229137935\|ref\|ZP_04266534.1\| hypothetical protein bcere0013_10600 [Bacillus cereus BDRD-ST26], gi... gi\|228628763, gi... - gi\|229154815\|ref\|ZP_04282930.1\| hypothetical protein bcere0010_10100 [Bacillus cereus ATCC 4342], gi... gi\|206737434, gi... - gi\|206968514\|ref\|ZP_03229470.1\| spore germination protein GerPB [Bacillus cereus AH1134], gi\|2067374... GERPB_BACCR - Probable spore germination protein GerPB OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 /... gi\|206976534, gi... - gi\|206976534\|ref\|ZP_03237440.1\| spore germination protein GerPB [Bacillus cereus H3081.97], gi\|20674... gi\|217067431, gi... - gi\|217958725\|ref\|YP_002337273.1\| spore germination protein GerPB [Bacillus cereus AH187], gi\|2170674... gi\|42736244, gi\|... - gi\|42780325\|ref\|NP_977572.1\| spore germination protein GerPB [Bacillus cereus ATCC 10987], gi\|427362... gi\|218159406, gi... - gi\|218231449\|ref\|YP_002365932.1\| spore germination protein GerPB [Bacillus cereus B4264], gi\|2181594... gi\|221238927, gi... - gi\|222094869\|ref\|YP_002528929.1\| spore germination protein GerPB [Bacillus cereus Q1], gi\|221238927\|... gi\|228821311, gi... - gi\|228938365\|ref\|ZP_04100976.1\| hypothetical protein bthur0008_10310 [Bacillus thuringiensis serovar... GERPB_BACCE - Probable spore germination protein GerPB OS=Bacillus cereus GN=gerPB PE=1 SV=1 gi\|228788479, gi... - gi\|228971244\|ref\|ZP_04131873.1\| hypothetical protein bthur0003_10240 [Bacillus thuringiensis serovar... gi\|47555802, gi\|... - gi\|47567607\|ref\|ZP_00238318.1\| spore germination protein PB-related protein [Bacillus cereus G9241],... gi\|228781871, gi... - gi\|228977853\|ref\|ZP_04138235.1\| hypothetical protein bthur0002_10600 [Bacillus thuringiensis Bt407],...	97.0	[0..1]	[68..1]
gi\|228899825, gi... - gi\|228899825\|ref\|ZP_04064071.1\| hypothetical protein bthur0014_10380 [Bacillus thuringiensis IBL 422... gi\|218544086, gi... - gi\|218896183\|ref\|YP_002444594.1\| spore germination protein GerPB [Bacillus cereus G9842], gi\|2185440... gi\|75760169, gi\|... - gi\|75760169\|ref\|ZP_00740227.1\| Spore germination protein PB [Bacillus thuringiensis serovar israelen...	95.0	[0..1]	[68..1]
gi\|89156475, gi\|... - gi\|89205681\|ref\|ZP_01184249.1\| spore germination protein GerPB [Bacillus weihenstephanensis KBAB4], ... gi\|229171892, gi... - gi\|229171892\|ref\|ZP_04299461.1\| hypothetical protein bcere0006_10090 [Bacillus cereus MM3], gi\|22861... gi\|229160204, gi... - gi\|229160204\|ref\|ZP_04288203.1\| hypothetical protein bcere0009_9990 [Bacillus cereus R309803], gi\|22...	95.0	[0..1]	[68..1]
gi\|52002783, gi\|... - gi\|52784936\|ref\|YP_090765.1\| GerPB [Bacillus licheniformis ATCC 14580], gi\|52347438\|gb\|AAU40072.1\| G...	90.0	[0..1]	[55..1]
gi\|89201754, gi\|... - gi\|89201754\|ref\|ZP_01180490.1\| spore germination protein PB [Bacillus cereus subsp. cytotoxis NVH 39...	86.0	[0..1]	[68..1]
gi\|89087187, gi\|... - gi\|89098024\|ref\|ZP_01170910.1\| spore germination protein [Bacillus sp. NRRL B-14911], gi\|89087187\|gb...	71.0	[0..1]	[56..1]
gi\|56419224, gi\|... - gi\|56419224\|ref\|YP_146542.1\| spore germination protein [Geobacillus kaustophilus HTA426], gi\|5637906...	60.0	[0..1]	[51..1]

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Predicted Domain #1

Region A:
Residues: [1-68]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFYVNQSII INSIKIDSIT TSSVFQIGTA GSIKSLSKFS NTGGFTEPLR PLQAKGQIIS  60
   61 IKPSTSSS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits