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View Structure Prediction Details

Protein: gi|21399939
Organism: Bacillus anthracis str. A2012
Length: 384 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21399939.

Description E-value Query
Range
Subject
Range
gi|49481269, gi|... - gi|49481269|ref|YP_036214.1| stage II sporulation protein P [Bacillus thuringiensis serovar konkukia...
gi|218903215, gi... - gi|218903215|ref|YP_002451049.1| stage II sporulation protein P [Bacillus cereus AH820], gi|21853488...
gi|229121638, gi... - gi|229121638|ref|ZP_04250863.1| Stage II sporulation protein P [Bacillus cereus 95/8201], gi|2286618...
gi|228914675, gi... - gi|228914675|ref|ZP_04078284.1| Stage II sporulation protein P [Bacillus thuringiensis serovar pulsi...
0.0 [1..384] [1..384]
gi|42737127, gi|... - gi|42781205|ref|NP_978452.1| stage II sporulation protein P [Bacillus cereus ATCC 10987], gi|4273712...
gi|229196318, gi... - gi|229196318|ref|ZP_04323066.1| Stage II sporulation protein P [Bacillus cereus m1293], gi|228587172...
0.0 [1..384] [1..384]
gi|89208756, gi|... - gi|89208756|ref|ZP_01187245.1| Stage II sporulation P [Bacillus weihenstephanensis KBAB4], gi|891533...
0.0 [1..384] [1..384]
gi|47566834, gi|... - gi|47566834|ref|ZP_00237552.1| stage II sporulation protein P [Bacillus cereus G9241], gi|47556463|g...
0.0 [1..384] [1..384]
gi|75764737, gi|... - gi|75764737|ref|ZP_00744142.1| Stage II sporulation protein P [Bacillus thuringiensis serovar israel...
gi|218542589, gi... - gi|218897059|ref|YP_002445470.1| stage II sporulation protein P [Bacillus cereus G9842], gi|21854258...
0.0 [1..384] [1..384]
gi|30020187, gi|... - gi|30020187|ref|NP_831818.1| stage II sporulation protein P [Bacillus cereus ATCC 14579], gi|2989573...
gi|218159439, gi... - gi|218231482|ref|YP_002366774.1| stage II sporulation protein P [Bacillus cereus B4264], gi|21815943...
0.0 [1..384] [1..384]
gi|65319375 - gi|65319375|ref|ZP_00392334.1| hypothetical protein Bant_01002682 [Bacillus anthracis str. A2012]
0.0 [8..384] [1..377]
gi|89149241, gi|... - gi|89202737|ref|ZP_01181449.1| Stage II sporulation P [Bacillus cereus subsp. cytotoxis NVH 391-98],...
0.0 [1..384] [1..384]
gi|25352755 - pir||G83887 stage II sporulation protein P spoIIP [imported] - Bacillus halodurans (strain C-125)
gi|15614466, gi|... - gi|15614466|ref|NP_242769.1| stage II sporulation protein P [Bacillus halodurans C-125], gi|10174521...
0.0 [5..380] [2..375]

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Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRGFFYVKF TSVRKLVLFI IATVLATFFL ISMMVTSMKE TKSTYLYNWL NELSMNGYMY  60
   61 VLGKENHYFT QEYRNLNQDF SISSFLFSMA TNIRFNDVRS FVGKELPGFG KYDTEIVIAG 120
  121 EGTNYSNLPI ESSVPLEEVV KERT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.638 N/A N/A a.77.1 DEATH domain
View Download 0.571 N/A N/A a.4.5 "Winged helix" DNA-binding domain
View Download 0.533 N/A N/A a.4.5 "Winged helix" DNA-binding domain
View Download 0.476 N/A N/A a.85.1 Hemocyanin, N-terminal domain
View Download 0.472 N/A N/A a.74.1 Cyclin-like

Predicted Domain #2
Region A:
Residues: [145-277]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEGGQAPKPD TNKEKKQPAQ TTGKRQVAFI YHSHSWESYL PLLNLTNDPN PNKATSSVTN  60
   61 ISIVGDRFRE QLANEGIGAT NDKTDVGQKL ISKGLNSNSS YKMSREIVQE AMTSNKELQY 120
  121 FFDLHRDSAR KNV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [278-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTKAIGDKSY AKLAFVIGKG NKNYEKNLQL ATALHETINK KYPGVSRGVI QKGFQTGNGV  60
   61 YNQDLSGQAI LIEVGGVDNT EEELNRSIDV LAKAFGEYFW QAEKVNG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle