YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258980, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	327 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258980, gi|....

Description	E-value	Query Range	Subject Range
gi\|182628928, gi... - gi\|182683594\|ref\|YP_001835341.1\| glucokinase [Streptococcus pneumoniae CGSP14], gi\|182628928\|gb\|ACB8... gi\|194357009, gi... - gi\|194397342\|ref\|YP_002037324.1\| glucokinase [Streptococcus pneumoniae G54], gi\|194357009\|gb\|ACF5545... gi\|66879641, gi\|... - gi\|66879641\|ref\|ZP_00404658.1\| COG1940: Transcriptional regulator/sugar kinase [Streptococcus pneumo... gi\|25511505 - pir\|\|H97944 glucokinase (EC 2.7.1.2) [imported] - Streptococcus pneumoniae (strain R6) gi\|15902628, gi\|... - gi\|15902628\|ref\|NP_358178.1\| glucokinase [Streptococcus pneumoniae R6], gi\|15458164\|gb\|AAK99388.1\| G...	1.0E-66	[1..319]	[6..325]
gi\|15900569, gi\|... - gi\|15900569\|ref\|NP_345173.1\| glucokinase [Streptococcus pneumoniae TIGR4], gi\|14972142\|gb\|AAK74813.1... gi\|25388547 - pir\|\|D95077 glucokinase [imported] - Streptococcus pneumoniae (strain TIGR4)	3.0E-66	[1..319]	[1..320]
gi\|172043847, gi... - gi\|172043847\|gb\|EDT51893.1\| glucokinase (Glucose kinase) [Streptococcus pneumoniae CDC1873-00], gi\|1... gi\|183569871, gi... - gi\|183569871\|gb\|EDT90399.1\| glucokinase (Glucose kinase) [Streptococcus pneumoniae CDC1087-00], gi\|1... gi\|221231484, gi... - gi\|221231484\|ref\|YP_002510636.1\| glucokinase [Streptococcus pneumoniae ATCC 700669], gi\|220673944\|em... gi\|116077604, gi... - gi\|116517028\|ref\|YP_816079.1\| glucokinase [Streptococcus pneumoniae D39], gi\|116077604\|gb\|ABJ55324.1... gi\|225723760, gi... - gi\|225854194\|ref\|YP_002735706.1\| glucokinase (Glucose kinase) [Streptococcus pneumoniae JJA], gi\|225... gi\|147922449, gi... - gi\|148985251\|ref\|ZP_01818474.1\| glucokinase [Streptococcus pneumoniae SP3-BS71], gi\|147922449\|gb\|EDK... gi\|237650311 - gi\|237650311\|ref\|ZP_04524563.1\| glucokinase [Streptococcus pneumoniae CCRI 1974] gi\|147925537, gi... - gi\|148989040\|ref\|ZP_01820440.1\| 50S ribosomal protein L1 [Streptococcus pneumoniae SP6-BS73], gi\|147... gi\|237821972 - gi\|237821972\|ref\|ZP_04597817.1\| glucokinase [Streptococcus pneumoniae CCRI 1974M2] gi\|147759676, gi... - gi\|149002361\|ref\|ZP_01827303.1\| 50S ribosomal protein L1 [Streptococcus pneumoniae SP14-BS69], gi\|14... gi\|147762725, gi... - gi\|149005785\|ref\|ZP_01829524.1\| 50S ribosomal protein L1 [Streptococcus pneumoniae SP18-BS74], gi\|14... gi\|149010710, gi... - gi\|149010710\|ref\|ZP_01832081.1\| glucokinase [Streptococcus pneumoniae SP19-BS75], gi\|147765191\|gb\|ED...	4.0E-65	[2..319]	[1..319]
gi\|15674005, gi\|... - gi\|15674005\|ref\|NP_268180.1\| glucokinase [Lactococcus lactis subsp. lactis Il1403], gi\|12725071\|gb\|A... gi\|25298212 - pir\|\|G86877 glucokinase (EC 2.7.1.2) [imported] - Lactococcus lactis subsp. lactis (strain IL1403)	1.0E-64	[1..319]	[1..319]
gi\|47567825, gi\|... - gi\|47567825\|ref\|ZP_00238533.1\| glucokinase [Bacillus cereus G9241], gi\|47555502\|gb\|EAL13845.1\| gluco...	1.0E-64	[1..327]	[1..327]
gi\|116108624, gi... - gi\|62462158\|ref\|ZP_00381619.1\| COG1940: Transcriptional regulator/sugar kinase [Lactococcus lactis s...	3.0E-64	[1..319]	[1..319]
gi\|229135087, gi... - gi\|229135087\|ref\|ZP_04263890.1\| Glucokinase [Bacillus cereus BDRD-ST196], gi\|228648375\|gb\|EEL04407.1... gi\|163942022, gi... - gi\|89207552\|ref\|ZP_01186091.1\| Glucokinase ROK [Bacillus weihenstephanensis KBAB4], gi\|89154523\|gb\|E...	3.0E-64	[1..327]	[1..327]
gi\|228778742, gi... - gi\|228980951\|ref\|ZP_04141254.1\| Glucokinase [Bacillus thuringiensis Bt407], gi\|228778742\|gb\|EEM27006... gi\|228785408, gi... - gi\|228974358\|ref\|ZP_04134927.1\| Glucokinase [Bacillus thuringiensis serovar thuringiensis str. T0100... gi\|218163388, gi... - gi\|218235431\|ref\|YP_002369068.1\| glucokinase [Bacillus cereus B4264], gi\|218163388\|gb\|ACK63380.1\| gl... gi\|228792362, gi... - gi\|228967327\|ref\|ZP_04128362.1\| Glucokinase [Bacillus thuringiensis serovar sotto str. T04001], gi\|2... gi\|218899429, gi... - gi\|218899429\|ref\|YP_002447840.1\| glucokinase [Bacillus cereus G9842], gi\|218542410\|gb\|ACK94804.1\| gl... gi\|228960529, gi... - gi\|228960529\|ref\|ZP_04122178.1\| Glucokinase [Bacillus thuringiensis serovar pakistani str. T13001], ... gi\|229146849, gi... - gi\|229146849\|ref\|ZP_04275214.1\| Glucokinase [Bacillus cereus BDRD-ST24], gi\|228636677\|gb\|EEK93142.1\|... gi\|206733774, gi... - gi\|206971002\|ref\|ZP_03231953.1\| glucokinase [Bacillus cereus AH1134], gi\|206733774\|gb\|EDZ50945.1\| gl... gi\|229129542, gi... - gi\|229129542\|ref\|ZP_04258513.1\| Glucokinase [Bacillus cereus BDRD-Cer4], gi\|228654147\|gb\|EEL10014.1\|... gi\|228701829, gi... - gi\|229081522\|ref\|ZP_04214021.1\| Glucokinase [Bacillus cereus Rock4-2], gi\|228701829\|gb\|EEL54316.1\| G... gi\|229071766, gi... - gi\|229071766\|ref\|ZP_04204981.1\| Glucokinase [Bacillus cereus F65185], gi\|228711361\|gb\|EEL63321.1\| Gl... gi\|228591050, gi... - gi\|229192473\|ref\|ZP_04319436.1\| Glucokinase [Bacillus cereus ATCC 10876], gi\|228591050\|gb\|EEK48906.1... gi\|229152463, gi... - gi\|229152463\|ref\|ZP_04280655.1\| Glucokinase [Bacillus cereus m1550], gi\|228631071\|gb\|EEK87708.1\| Glu... gi\|29897900, gi\|... - gi\|30022343\|ref\|NP_833974.1\| glucokinase [Bacillus cereus ATCC 14579], gi\|29897900\|gb\|AAP11175.1\| Gl... gi\|228954547, gi... - gi\|228954547\|ref\|ZP_04116572.1\| Glucokinase [Bacillus thuringiensis serovar kurstaki str. T03a001], ... gi\|228818208, gi... - gi\|228941427\|ref\|ZP_04103978.1\| Glucokinase [Bacillus thuringiensis serovar berliner ATCC 10792], gi... gi\|228923015, gi... - gi\|228923015\|ref\|ZP_04086308.1\| Glucokinase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]... gi\|228910097, gi... - gi\|228910097\|ref\|ZP_04073917.1\| Glucokinase [Bacillus thuringiensis IBL 200], gi\|228849614\|gb\|EEM944...	3.0E-64	[1..327]	[1..327]
gi\|152976696, gi... - gi\|89201781\|ref\|ZP_01180516.1\| Glucokinase ROK [Bacillus cereus subsp. cytotoxis NVH 391-98], gi\|891...	1.0E-63	[1..327]	[1..327]
gi\|71911070, gi\|... - gi\|71911070\|ref\|YP_282620.1\| glucokinase/xylose repressor [Streptococcus pyogenes MGAS5005], gi\|7185... gi\|94990782, gi\|... - gi\|94990782\|ref\|YP_598882.1\| glucokinase [Streptococcus pyogenes MGAS10270], gi\|94544290\|gb\|ABF34338... gi\|15675428, gi\|... - gi\|15675428\|ref\|NP_269602.1\| glucose kinase [Streptococcus pyogenes M1 GAS], gi\|13622617\|gb\|AAK34323... gi\|56808768 - gi\|56808768\|ref\|ZP_00366485.1\| COG1940: Transcriptional regulator/sugar kinase [Streptococcus pyogen... gi\|71802953, gi\|... - gi\|71903858\|ref\|YP_280661.1\| glucokinase [Streptococcus pyogenes MGAS6180], gi\|71802953\|gb\|AAX72306.... gi\|21904919, gi\|... - gi\|21910716\|ref\|NP_664984.1\| putative glucose kinase [Streptococcus pyogenes MGAS315], gi\|21904919\|g... gi\|209540893, gi... - gi\|209559692\|ref\|YP_002286164.1\| Glucokinase [Streptococcus pyogenes NZ131], gi\|209540893\|gb\|ACI6146... gi\|28895594, gi\|... - gi\|28895594\|ref\|NP_801944.1\| putative glucose kinase [Streptococcus pyogenes SSI-1], gi\|28810843\|dbj...	2.0E-63	[2..319]	[1..319]

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Predicted Domain #1

Region A:
Residues: [1-327]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEKWLVGVD LGGTTIKLAF INVYGEILHK WEIPTNTNEQ GKHITLDVAK AIDKKLEELG  60
   61 ELKSKLIGIG MGAPGPVHVA SGMIYEAVNL GWKNYPLKDL LEVETGLPVV IDNDANLAAL 120
  121 GEMWKGAGEG AKDLICMTLG TGVGGGVIAN GEIVHGVSGA AGEIGHITVV TENAFPCNCG 180
  181 KSGCLETVAS ATGIVRVAMQ KIQETDKESI LRSMLAEEGR ITSKDVFEAH GQGDELAGEV 240
  241 VEKVASYLGL AVANLSSTLN PEKIVIGGGV SKAGDALLEP IQRYFEQYAF SRAVKSTKLA 300
  301 IATLGNDAGV IGGAWLVKKH KYEAKMI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	65.09691
Match:	2qm1A
Description:	No description for 2qm1A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits