YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260078, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	61 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260078, gi|....

Description	E-value	Query Range	Subject Range
gi\|73539515, gi\|... - gi\|73539515\|ref\|YP_299882.1\| 4-oxalocrotonate tautomerase [Ralstonia eutropha JMP134], gi\|72122852\|g...	7.0E-16	[1..60]	[1..60]
gi\|111283260, gi... - gi\|111616334\|ref\|ZP_01403366.1\| 4-oxalocrotonate tautomerase family enzyme [Acidovorax avenae subsp....	1.0E-15	[1..61]	[100..160]
gi\|71909392, gi\|... - gi\|71909392\|ref\|YP_286979.1\| 4-oxalocrotonate tautomerase [Dechloromonas aromatica RCB], gi\|71849013...	1.0E-15	[1..60]	[1..60]
gi\|110338207, gi... - gi\|121592661\|ref\|YP_984557.1\| 4-oxalocrotonate tautomerase [Acidovorax sp. JS42], gi\|120604741\|gb\|AB...	2.0E-15	[1..60]	[1..60]
gi\|51598119, gi\|... - gi\|51598119\|ref\|YP_072310.1\| tautomerase enzyme [Yersinia pseudotuberculosis IP 32953], gi\|51591401\|... Q664E0\|Q664E0_YERPS - Possible Tautomerase enzyme - Yersinia pseudotuberculosis	3.0E-15	[1..60]	[46..106]
gi\|72613424, gi\|... - gi\|74014822\|ref\|ZP_00685451.1\| 4-oxalocrotonate tautomerase [Burkholderia ambifaria AMMD], gi\|726134...	3.0E-15	[1..61]	[1..61]
gi\|145600607, gi... - gi\|145600607\|ref\|YP_001164683.1\| tautomerase [Yersinia pestis Pestoides F], gi\|145212303\|gb\|ABP41710... gi\|21960830, gi\|... - gi\|22127710\|ref\|NP_671133.1\| hypothetical protein y3839 [Yersinia pestis KIM], gi\|21960830\|gb\|AAM873... gi\|108777447, gi... - gi\|108813799\|ref\|YP_649566.1\| tautomerase [Yersinia pestis Nepal516], gi\|108777447\|gb\|ABG19966.1\| ta... gi\|45443101, gi\|... - gi\|45443101\|ref\|NP_994640.1\| hypothetical protein YP_3352 [Yersinia pestis biovar Microtus str. 9100... gi\|108809808, gi... - gi\|108809808\|ref\|YP_653724.1\| putative tautomerase [Yersinia pestis Antiqua], gi\|108781721\|gb\|ABG157...	3.0E-15	[1..60]	[46..106]
gi\|77631046 - gi\|77631046\|ref\|ZP_00793632.1\| COG1942: Uncharacterized protein, 4-oxalocrotonate tautomerase homolo...	3.0E-15	[1..60]	[5..65]
gi\|89201465, gi\|... - gi\|89201465\|ref\|ZP_01180205.1\| 4-oxalocrotonate tautomerase [Bacillus cereus subsp. cytotoxis NVH 39...	5.0E-15	[1..61]	[32..92]
gi\|67103013, gi\|... - gi\|67663461\|ref\|ZP_00460743.1\| 4-oxalocrotonate tautomerase [Burkholderia cenocepacia HI2424], gi\|67... gi\|118654134, gi... - gi\|170737974\|ref\|YP_001779234.1\| 4-oxalocrotonate tautomerase [Burkholderia cenocepacia MC0-3], gi\|1... gi\|107026040, gi... - gi\|67659749\|ref\|ZP_00457107.1\| 4-oxalocrotonate tautomerase [Burkholderia cenocepacia AU 1054], gi\|6...	6.0E-15	[1..61]	[1..61]

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Predicted Domain #1

Region A:
Residues: [1-61]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYVTVKMLE GRTEEQKKAL AEKVTAAVSE TTGAPEENIV VFIEEMSKNH YAVGGKRLSD  60
   61 K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	14.0
Match:	1otfA
Description:	4-oxalocrotonate tautomerase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.20739155013755	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: