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View Structure Prediction Details

Protein: gi|52424565, gi|...
Organism: Mannheimia succiniciproducens MBEL55E
Length: 241 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52424565, gi|....

Description E-value Query
Range
Subject
Range
gi|12720314, gi|... - gi|15601968|ref|NP_245040.1| hypothetical protein PM0103 [Pasteurella multocida subsp. multocida str...
212.0 [0..1] [241..1]

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Predicted Domain #1
Region A:
Residues: [1-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLIRIILV AICCVLICVL GTIFSLIRFR HPSNVGVMAR WFGRLYPLFG LRVEHRFPDN  60
   61 VDQNVPAIYI GNHQNNYDMV TISYMVRPRT VSVGKKSLIW VPFFGILYWA TGNIFLDRDN 120
  121 KNKAHNTMTE LARRIQQDNI SIWMFPEGTR SRGRGLLPFK TGAFHAAISA GVPIIPVVCS 180
  181 TTHKKIDLNR WNNGKVICEI MQPIDTQSYS KENVRELASH CYDLMKKRIA ELDAELAQVG 240
  241 K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.0
Match: 1iuqA
Description: The 1.55 A Crystal Structure of Glycerol-3-Phosphate Acyltransferase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle