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View Structure Prediction Details

Protein: CRK22_ARATH
Organism: Arabidopsis thaliana
Length: 660 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRK22_ARATH.

Description E-value Query
Range
Subject
Range
gi|4127461 - gi|4127461|emb|CAA09731.1| receptor-like protein kinase, RLK3 [Arabidopsis thaliana]
542.0 [0..1] [659..1]

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Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQRSFLSIL CFILLAFGVA SVSAQTCIEN RKYFTPNGTY DSNRRLILSS LPNNTASQDG  60
   61 FYYGSIGEEQ DRVYALGMCI PRSTPSDCFN CIKGAAGWLI QDCVNQTDAY YWALDPTLCL 120
  121 VRYSNISFSG 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 18.958607
Match: PF01657.8
Description: No description for PF01657.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [131-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SAAFWEIEPQ YLVLNTATIA SDLTDFKNIW EDLTSRTITA ASAARSTPSS SDNHYRVDFA  60
   61 NLTKFQNIYA LMQCTPDISS DECNNCLQRG VLEYQSCCGN NTGGYVMRPI CFFRWQLFTF 120
  121 SKAFHNITLA TPPKPPMNVP RPPSVGHGAN TTDNDSRGVS AGIVVVITVP AVVIVLILVV 180
  181 LGFFICWRRK SLQRTEF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 23.60206
Match: PF01657.8
Description: No description for PF01657.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [328-660]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESDSDVSTTN SLQYEFKTIE AATNKFSKSN KLGEGRFGEV YKGKFSNGTE VAVKRLSKVS  60
   61 GQDTKKFRNE AVLVSKIQHR NLARLLGFCL QGDGKFLIYE FVLNKSLDYF LFDPEKQGEL 120
  121 DWTRRYKIIG GIAQGILHLH QDPQLTIIYR DFKASNILLD ADMNPKISDF GMATVFGMEE 180
  181 SRGNTNWIAE TFVYMSPEYA VHGKFSMKSD VYSFGILILE IISGKKNSSL YQNDETTTAG 240
  241 NLVTYAWRLW RNGSQLKLLD SSIGRNYQSN EVTRCIHIAL LCVQENPEDR PKLSTIVSML 300
  301 TSNTISVPAP GIPGFFPQSR RELDPLSEGL ESG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.69897
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle