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View Structure Prediction Details

Protein: DPE2_ARATH
Organism: Arabidopsis thaliana
Length: 955 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DPE2_ARATH.

Description E-value Query
Range
Subject
Range
gi|41176619 - gi|41176619|gb|AAR99599.1| 4-alpha-glucanotransferase; disproportionating enzyme [Solanum tuberosum]
969.0 [0..21] [954..11]

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Predicted Domain #1
Region A:
Residues: [1-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNLGSLSLS TSKSSKPMVS ISFWIPYFTH WGESLLVCGS APGLGSGNVK KGLLLKPSQQ  60
   61 DDQLIWSGSV SVPPGFSSDY CYYVVDDSKS VLRSEFGMKR KLVVPETLTG GESVHLRDLW 120
  121 QSGDQALPFR SAFKDVIFHH SFDVKVEKPL GVFMNKSDQD DSVVVQFKIC CPDIGEGTSV 180
  181 YVLGTPEKLG NWKVENGLRL NYVDDSIWEA DCLIPKADFP IKYRYCKVQK EDSIGFESGG 240
  241 NRELSLHSIG SKQEYI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.69897
Match: 1gcyA
Description: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase)
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [257-759]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VMSDGLFRAM PWRGAGVAVP MFSVRSEDDV GVGEFLDLKL LVDWAVDSGL HLVQLLPVND  60
   61 TSVHKMWWDS YPYSSLSVFA LHPLYLRVQA LSERLPEDIK EEIQKAKNQL DKNDVDYEAT 120
  121 METKLSIAKK IFDIEKDQTL NSSTFQKFFS ENEGWLKPYA AFCFLRDFFE TSDHSQWGTF 180
  181 SDYTDDKLEK LISKDNLHYN TICFHYYIQY HLHVQLSAAA EYARKKGVVL KGDLPIGVDR 240
  241 NSVDTWVYRN LFRMNTSTGA PPDYFDKNGQ NWGFPTYNWE EMSKDNYAWW RARLTQMGKY 300
  301 FTAYRIDHIL GFFRIWELPA HAMTGLVGKF RPSIPLSQEE LEKEGIWDFD RLSKPYIQKK 360
  361 FLEEKFGDFW PFIASNFLNE TQKDMYEFKE DCNTEKKIVA KLKSLAEKSL LLENEDKVRR 420
  421 DVFDILRNVV LIKDPEDARK FYPRFNIEDT SSFQDLDDHS KNVLKRLYYD YYFQRQEDLW 480
  481 RKNALKTLPA LLNSSNMLAC GED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 131.0
Match: 2owcA
Description: No description for 2owcA was found.

Predicted Domain #3
Region A:
Residues: [760-955]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGLIPSCVHP VMQELGLVGL RIQRMPSESD VKFGIPSNYD YMTVCAPSCH DCSTLRAWWE  60
   61 EDEERRQQYF KEVIGVDGIP PSQCIPEITH FILRQHVEAP SMWAIFPLQD MMALKEEYTT 120
  121 RPATEETIND PTNPKHYWRY RVHVTLDSLL KDTDLKSTIK NLVSSSGRSV PANVSGEDIN 180
  181 KSRGEVIANG STKPNP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.28
Match: 1tz7A
Description: Aquifex aeolicus amylomaltase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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