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View Structure Prediction Details

Protein: CE37733
Organism: Caenorhabditis elegans
Length: 245 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37733.

Description E-value Query
Range
Subject
Range
gi|157756879 - gi|157756879|ref|XP_001670783.1| Hypothetical protein CBG03382 [Caenorhabditis briggsae AF16]
gi|187036606, gi... - gi|39585696|emb|CAE59898.1| Hypothetical protein CBG03382 [Caenorhabditis briggsae], gi|187036606|em...
386.0 [0..1] [244..1]

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Predicted Domain #1
Region A:
Residues: [1-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSRNDGPAL LKRRSAKPFA GNLRLRRLTK AYLEPLDDNN KEMSPTVAKI DQIYDLTQEL  60
   61 IVQCQSVTSG LFPRYSKDRD VGYVKDSIYC AMACWACSVA YKRLDDDRGR QTELRQTAVK 120
  121 TMRGILFSWM QQSKNLDAFK SQNSSEFALH ARFDLSSGMG LETPNDDLHY GHLQMDLVAL 180
  181 YLLTLVQMIS AGCKVIYTHH EVNFIQNLVF YIERTYRTPD FGMWERGTRY NNGKPELHAS 240
  241 SLGSF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.36
Match: 1gaiA
Description: GLUCOAMYLASE-471 COMPLEXED WITH D-GLUCO-DIHYDROACARBOSE
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle