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View Structure Prediction Details

Protein: gi|6683933
Organism: Plasmodium falciparum
Length: 398 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6683933.

Description E-value Query
Range
Subject
Range
gi|6683935, gi|6... - gi|6683935|gb|AAF23401.1| rhoptry-associated protein 2; RAP2 [Plasmodium falciparum], gi|6118349|gb|...
624.0 [0..1] [398..1]
gi|23504501, gi|... - gi|23613039|ref|NP_703361.1| rhoptry-associated protein, putative [Plasmodium falciparum 3D7], gi|23...
571.0 [0..1] [398..1]
gi|23478687 - gi|23478687|gb|EAA15706.1| RAP2, putative [Plasmodium yoelii yoelii]
gi|82539519 - gi|82539519|ref|XP_724141.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
523.0 [0..1] [394..1]
gi|68064534 - gi|68064534|ref|XP_674251.1| rhoptry-associated protein [Plasmodium berghei strain ANKA]
gi|56492690 - gi|56492690|emb|CAI03992.1| rhoptry-associated protein, putative [Plasmodium berghei]
408.0 [0..7] [394..1]
gi|72388793 - gi|72388793|gb|AAZ68036.1| rhoptry-associated protein 2 [Plasmodium vivax]
379.0 [0..1] [394..1]
gi|56522777 - gi|56522777|emb|CAH74690.1| rhoptry-associated protein, putative [Plasmodium chabaudi chabaudi]
gi|70947428 - gi|70947428|ref|XP_743330.1| rhoptry-associated protein [Plasmodium chabaudi chabaudi]
325.0 [0..1] [395..1]

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Predicted Domain #1
Region A:
Residues: [1-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLKFYVLVF LILCLKNVVK GDKCETEFSK LYPESNSLTG LIYAHTANVH KLSMWVYFIY  60
   61 NHFSSADELI KYLEKTNINT LENSDHTCFA RAVTLYLFYY YLKDIKSMLS TDDYQSFFKN 120
  121 KFKDINPLFI NDFILILNDK KFMENLDLYI MKESEREHLV IKKNPFLRVL NKASTTTHAT 180
  181 YKSNPYFIVG SRVHTPYKDY LGD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [204-398]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FNKYTEISVL NYVRDYNFLI YAGSRENYYN SDIAGPARSV NNVISKNKTL GLRKRSSSLA  60
   61 LVGTNNNDPI FAYCEKDNKS EYYGTPDDLI TSFFSIIKTK MLNSHKTFLR QFDYALFHKT 120
  121 YSIPNLKGFR FLKHLFQKKN LVNFVGMYEN HVSTEINFLA EDFVELFDVT MDCYSRQYSN 180
  181 RAAENFKAIR ELNVL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.535 a.29.5 alpha-ketoacid dehydrogenase kinase, N-terminal domain
View Download 0.494 a.25.1 Ferritin-like
View Download 0.490 a.63.1 Apolipophorin-III
View Download 0.482 a.29.2 Bromodomain
View Download 0.464 a.60.9 lambda integrase-like, N-terminal domain


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