YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ERDL9_ARATH
Organism: Arabidopsis thaliana
Length: 327 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERDL9_ARATH.

Description E-value Query
Range
Subject
Range
gi|91078244 - gi|91078244|ref|XP_970364.1| PREDICTED: similar to CG10960-PB, isoform B [Tribolium castaneum]
226.0 [0..3] [326..664]

Back

Predicted Domain #1
Region A:
Residues: [1-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGENSSIEK GLLLIRKEES ANTTPFLVFT TFIIVSASFS FGVALGHTAG TMASIMEDLD  60
   61 LSITQFSVFG SLLTFGGMIG ALFSATIADS FGCKMTLWIT EVFCISGWLA IALAKNIIWL 120
  121 DLGRFFVGIG VGLLSYVVPV YIAEITPKTV RGTFTFSNQL LQNCGVATAY YLGNFMSWRI 180
  181 IALIGILPCL IQLVGLFFVP ESPRWLAKEG RDEECEVVLQ KLRGDEADIV KETQEILISV 240
  241 EASANISMRS LFKKKYTHQL TIGIGLMLLQ QLSGSAGLGY YTGSVFDLAG FPSRIGMTVL 300
  301 SIVVVPKAIL GLILVERWGR RPLLMVM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.0
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle