| Protein: | TIF4A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 313 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIF4A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
330.0 | [0..1] | [312..335] |
|
Region A: Residues: [1-152] |
1 11 21 31 41 51
| | | | | |
1 MDVGVSPAKS ILAKPLKLLT EEDISQLTRE DCRKFLKDKG MRRPSWNKSQ AIQQVLSLKA 60
61 LYEPGDDSGA GIFRKILVSQ PVNPPRVTTT LIEPSNELEA CGRVSYPEDN GACHRMDSPR 120
121 SAEFSGGSGH FVSEKDGHKT TISPRSPAET SE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.567 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.353 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.336 | a.1.1 | Globin-like |
| View | Download | 0.296 | a.118.8 | TPR-like |
| View | Download | 0.277 | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
|
Region A: Residues: [153-313] |
1 11 21 31 41 51
| | | | | |
1 LVGQMTIFYS GKVNVYDGIP PEKARSIMHF AANPIDLPEN GIFASSRMIS KLISKEKMME 60
61 LPQKGLEKAN SSRDSGMEGQ ANRKVSLQRY REKRKDRKFS KAKKCPGVAS SSLEMFLNCQ 120
121 PRMKAAYSQN LGCTGSPLHS QSPESQTKSP NLSVDLNSEG I
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.218 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
