YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG10737-PE
Organism: Drosophila melanogaster
Length: 903 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG10737-PE.

Description E-value Query
Range
Subject
Range
gi|16183606 - gi|16183606|gb|AAL13712.1| GM13116p [Drosophila melanogaster]
482.0 [0..1] [890..22]

Back

Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSLAIFIFL WAVLALFSVW LIKLLYHKYL NKDKSASAAN SRQTSVAPTS GSPTSVAGKT  60
   61 EKRLSEPRDL LATKSKVEGL DLSKPLAGAS GGRGRSSASP LNTAGAAAGG PRRRVVRQSS 120
  121 TGPENRK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [128-456]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRYVPPPSNV VGPETSSVTW TSQVFRWLYS DLVIVNELLM SWVIAINDTL RKSVEEHGVA  60
   61 VEVVRVLPDS PAPGLNNIFC NCDENNPADM LITFDCDAMP VLQVKTFRQK SGKVETSHYK 120
  121 VTVSRFRARM AIPMNYNSLK GEMRVEGYPD VRIAMNSVGA IKAMDQDEQQ LQTVISDILT 180
  181 TALRDTIYPV DFSIYSTCPR AEVEPLDLPH NMEQHMGGVG LRDSQHMVSG RRLLVKIVKG 240
  241 DGIRDAQNPY VVIEMDEPAQ KNQTGTQRGG KPFWDEHFLF ELSPQSAEIL FEVYDHPVIA 300
  301 SDPPKFLGLG LVGIDELAVG PASTQLLQL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.30103
Match: 1dqvA
Description: Synaptogamin I
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [457-605]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPRPYETQPV SGAITVDFVF IEGAEIPAGA RPQRLKEALR LSTPAINEHI RNGADLADAA  60
   61 VRALQDGALS SSGSGGQPSK STLIIHSVQR NSSSPNAFKV ELNRDGQIEV TDTATELDQA 120
  121 VAQAFERAAN EAQTELELEL AKEEKSSQL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.69897
Match: 1cjyA
Description: Domain from cytosolic phospholipase A2; Cytosolic phospholipase A2 catalytic domain
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [606-688]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEPLIDSGNG TVNEESTAEF GQPNAASSPN GSSYHNNYSL NGNGNSNGAG SGGYNSLPRN  60
   61 GGAQQLAQQS GLLEGHDVVD DRG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [689-903]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSKKRNFFGT LKKRLSRSKT RTLSADQPNN NSHKSLSATN SNTTTATGFP RTATGTLNGP  60
   61 RMGIGHSITD HSRRSSISES SAISGFSSAS NKTYVHEAST LVLETIENGI KRHFIVPLAI 120
  121 AQRPRWRRKG TKLHIYNDHT FIAKHLSGSG LQCSICMKSI PRRPGKQGYE CRDCQLISHK 180
  181 QCHIRAPQAC PNPTVLSMEL TKLNSAAADR SIRKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.522879
Match: 2i13A
Description: No description for 2i13A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle