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View Structure Prediction Details

Protein: EB1A_ARATH
Organism: Arabidopsis thaliana
Length: 276 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EB1A_ARATH.

Description E-value Query
Range
Subject
Range
gi|109102362 - gi|109102362|ref|XP_001088113.1| PREDICTED: similar to dihydropyrimidinase-like 5 [Macaca mulatta]
409.0 [0..1] [262..778]

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Predicted Domain #1
Region A:
Residues: [1-175]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATNIGMMDS AYFVGRNEIL TWINDRLHLN LSRVEEAASG AVQCQMLDMT FPGVVPMHKV  60
   61 NFDAKNEYDM IQNYKVLQDV FNKLKITKPL EINRLVKGRP LDNLEFLQWL KRFCDSINGG 120
  121 IMNENYNPVE RRSRNGKERS VKGSNKIPKS LQTNNNHPPP NSSSVGLSKA SGPKS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.221849
Match: 1wyoA
Description: Solution structure of the CH domain of human microtubule-associated protein RP/EB family member 3
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [176-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKAAEVQALS KELVDLKIST DLLEKERDFY FSKLRDVEIL CQTPELDDLP IVVAVKKILY  60
   61 ATDANESALE DAQEYLNQSL GVEDDEAEGN GEQLEEEKTQ A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.522879
Match: 1txqB
Description: Crystal structure of the EB1 C-terminal domain complexed with the CAP-Gly domain of p150Glued
Matching Structure (courtesy of the PDB):

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