YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30253571, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	217 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30253571, gi|....

Description	E-value	Query Range	Subject Range
gi\|65317519, gi\|... - gi\|65317519\|ref\|ZP_00390478.1\| hypothetical protein Bant_01000684 [Bacillus anthracis str. A2012], r...	4.0E-72	[1..217]	[1..216]
gi\|218536916, gi... - gi\|218901261\|ref\|YP_002449095.1\| spore cortex biosynthesis protein YabQ [Bacillus cereus AH820], gi\|... gi\|196027418, gi... - gi\|196041798\|ref\|ZP_03109088.1\| spore cortex biosynthesis protein YabQ [Bacillus cereus NVH0597-99],... gi\|52145154, gi\|... - gi\|52145154\|ref\|YP_081671.1\| hypothetical protein BCZK0054 [Bacillus cereus E33L], gi\|51978623\|gb\|AA...	3.0E-69	[1..217]	[1..217]
gi\|47569908, gi\|... - gi\|47569908\|ref\|ZP_00240575.1\| spore cortex biosynthesis protein [Bacillus cereus G9241], gi\|4755344...	3.0E-69	[1..217]	[1..217]
gi\|42735053, gi\|... - gi\|42779138\|ref\|NP_976385.1\| hypothetical protein BCE_0057 [Bacillus cereus ATCC 10987], gi\|42735053... gi\|222093829, gi... - gi\|222093829\|ref\|YP_002527878.1\| spore cortex biosynthesis protein [Bacillus cereus Q1], gi\|22123787... gi\|206977938, gi... - gi\|206977938\|ref\|ZP_03238825.1\| spore cortex biosynthesis protein YabQ [Bacillus cereus H3081.97], g...	4.0E-69	[1..217]	[1..217]
gi\|163938067, gi... - gi\|89207188\|ref\|ZP_01185734.1\| probable membrane protein [Bacillus weihenstephanensis KBAB4], gi\|891...	1.0E-67	[1..217]	[1..217]
gi\|29893870, gi\|... - gi\|30018330\|ref\|NP_829961.1\| spore cortex biosynthesis protein [Bacillus cereus ATCC 14579], gi\|2989...	6.0E-65	[7..217]	[1..211]
gi\|89149738, gi\|... - gi\|89202221\|ref\|ZP_01180949.1\| probable membrane protein [Bacillus cereus subsp. cytotoxis NVH 391-9...	6.0E-58	[1..217]	[1..217]
gi\|221312193 - gi\|221312193\|ref\|ZP_03593998.1\| hypothetical protein BsubsN3_00310 [Bacillus subtilis subsp. subtili... YABQ_BACSU - Spore protein YabQ OS=Bacillus subtilis (strain 168) GN=yabQ PE=2 SV=1 gi\|221317126 - gi\|221317126\|ref\|ZP_03598420.1\| hypothetical protein BsubsJ_00310 [Bacillus subtilis subsp. subtilis... gi\|221321389 - gi\|221321389\|ref\|ZP_03602683.1\| hypothetical protein BsubsS_00310 [Bacillus subtilis subsp. subtilis... YABQ_BACSU - Spore protein yabQ OS=Bacillus subtilis GN=yabQ PE=2 SV=1	5.0E-51	[1..187]	[1..183]
gi\|23097524, gi\|... - gi\|23097524\|ref\|NP_690990.1\| hypothetical protein OB0069 [Oceanobacillus iheyensis HTE831], gi\|22775...	9.0E-49	[1..207]	[1..196]
gi\|25369825 - pir\|\|C83659 hypothetical protein BH0075 [imported] - Bacillus halodurans (strain C-125) gi\|10172687, gi\|... - gi\|15612638\|ref\|NP_240941.1\| hypothetical protein BH0075 [Bacillus halodurans C-125], gi\|10172687\|db...	9.0E-43	[1..211]	[1..198]

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Predicted Domain #1

Region A:
Residues: [1-102]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTIQLYTM LSMIGMGAWI GASLDTYQRF LKRQERKRWL VFIHDILFWI VQALFVFYVL  60
   61 LLVNEAELRI YVFLALLCGF AAYQSLLKAI YMRLLNFLIY IF

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	44.236572
Match:	PF09578.1
Description:	No description for PF09578.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [103-217]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VQTTHFFVQI IKLLMIKPVI IIAQLFIAFI LFLFRILLSI GHVLWKMVIW ILLFIWKVFF  60
   61 WPVRFIASLI WKLLPNRVKL FIMKHVGFLQ YIAKLKGHIF QLWERIKKKL GGPRK

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits