YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30259168, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	182 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259168, gi|....

Description	E-value	Query Range	Subject Range
gi\|228671477, gi... - gi\|229111913\|ref\|ZP_04241457.1\| Sporulation initiation phosphotransferase [Bacillus cereus Rock1-15]... gi\|228701552, gi... - gi\|229081707\|ref\|ZP_04214200.1\| Sporulation initiation phosphotransferase [Bacillus cereus Rock4-2],... gi\|228711110, gi... - gi\|229071951\|ref\|ZP_04205161.1\| Sporulation initiation phosphotransferase [Bacillus cereus F65185], ... gi\|228723141, gi... - gi\|229048154\|ref\|ZP_04193723.1\| Sporulation initiation phosphotransferase [Bacillus cereus AH676], g... gi\|30022516, gi\|... - gi\|30022516\|ref\|NP_834147.1\| sporulation initiation phosphotransferase B [Bacillus cereus ATCC 14579... gi\|228590743, gi... - gi\|229192653\|ref\|ZP_04319612.1\| Sporulation initiation phosphotransferase [Bacillus cereus ATCC 1087... gi\|229147012, gi... - gi\|229147012\|ref\|ZP_04275372.1\| Sporulation initiation phosphotransferase [Bacillus cereus BDRD-ST24... gi\|228653837, gi... - gi\|229129720\|ref\|ZP_04258688.1\| Sporulation initiation phosphotransferase [Bacillus cereus BDRD-Cer4... gi\|228798934, gi... - gi\|228960718\|ref\|ZP_04122357.1\| Sporulation initiation phosphotransferase [Bacillus thuringiensis se... gi\|228954725, gi... - gi\|228954725\|ref\|ZP_04116747.1\| Sporulation initiation phosphotransferase [Bacillus thuringiensis se... gi\|228923195, gi... - gi\|228923195\|ref\|ZP_04086485.1\| Sporulation initiation phosphotransferase [Bacillus thuringiensis se...	6.0E-82	[1..182]	[1..182]
gi\|47556662, gi\|... - gi\|47566632\|ref\|ZP_00237454.1\| sporulation initiation phosphotransferase B [Bacillus cereus G9241], ... gi\|228625377, gi... - gi\|229158058\|ref\|ZP_04286128.1\| Sporulation initiation phosphotransferase [Bacillus cereus ATCC 4342... gi\|228987694, gi... - gi\|228987694\|ref\|ZP_04147805.1\| Sporulation initiation phosphotransferase [Bacillus thuringiensis se...	1.0E-81	[1..182]	[1..182]
gi\|52141062, gi\|... - gi\|52141062\|ref\|YP_085765.1\| sporulation initiation phosphotransferase [Bacillus cereus E33L], gi\|51...	5.0E-81	[1..182]	[1..182]
gi\|75763160, gi\|... - gi\|75763160\|ref\|ZP_00742930.1\| Sporulation initiation phosphotransferase B [Bacillus thuringiensis s...	3.0E-79	[1..178]	[1..178]
gi\|229135267, gi... - gi\|229135267\|ref\|ZP_04264063.1\| Sporulation initiation phosphotransferase [Bacillus cereus BDRD-ST19... gi\|229062136, gi... - gi\|229062136\|ref\|ZP_04199460.1\| Sporulation initiation phosphotransferase [Bacillus cereus AH603], g... gi\|163864387, gi... - gi\|89205242\|ref\|ZP_01183813.1\| sporulation initiation phosphotransferase [Bacillus weihenstephanensi... gi\|228614250, gi... - gi\|229169184\|ref\|ZP_04296898.1\| Sporulation initiation phosphotransferase [Bacillus cereus AH621], g...	1.0E-75	[1..182]	[1..182]
gi\|89151603, gi\|... - gi\|89200284\|ref\|ZP_01179038.1\| spo0B; sporulation initiation phosphotransferase [Bacillus cereus sub...	3.0E-69	[1..178]	[1..178]
gi\|10173828, gi\|... - gi\|15613775\|ref\|NP_242078.1\| sporulation initiation phosphoprotein [Bacillus halodurans C-125], gi\|1... gi\|25299076 - pir\|\|D83801 sporulation initiation phosphoprotein spo0B [imported] - Bacillus halodurans (strain C-1...	7.0E-62	[1..168]	[1..167]
gi\|10120792, gi\|... - gi\|10120793\|pdb\|1F51\|D Chain D, A Transient Interaction Between Two Phosphorelay Proteins Trapped In...	2.0E-48	[6..138]	[10..144]
SP0B_BACSU - Sporulation initiation phosphotransferase B OS=Bacillus subtilis (strain 168) GN=spo0B PE=1 SV=1 SP0B_BACSU - Sporulation initiation phosphotransferase B OS=Bacillus subtilis GN=spo0B PE=1 SV=1 gi\|221315057 - gi\|221315057\|ref\|ZP_03596862.1\| sporulation initiation phosphotransferase [Bacillus subtilis subsp. ... gi\|221319977 - gi\|221319977\|ref\|ZP_03601271.1\| sporulation initiation phosphotransferase [Bacillus subtilis subsp. ... gi\|221324258 - gi\|221324258\|ref\|ZP_03605552.1\| sporulation initiation phosphotransferase [Bacillus subtilis subsp. ...	4.0E-48	[6..138]	[20..154]
gi\|52786652, gi\|... - gi\|52786652\|ref\|YP_092481.1\| Spo0B [Bacillus licheniformis ATCC 14580], gi\|52349154\|gb\|AAU41788.1\| S...	3.0E-39	[6..168]	[20..184]

Back

Predicted Domain #1

Region A:
Residues: [1-182]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKWTIIDA LRHSRHDWLN RMQMVKGNLS LGKVEEIHSL IDRFVQEARQ ESNLMGLSMP  60
   61 LFSEWILTYN WKQQPCLLEY EVLGNLHNLS HLDETVCTWT NQFFSMLQHS LDVYVENYVC 120
  121 ITIECDAENA RFFFDFRGKL TSVEELQNWL ANQNNKWYSI SYTVRDEEVS VILQPIEKSV 180
  181 VK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	50.0
Match:	1f51A
Description:	Sporulation responce regulatory protein Spo0B
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits