YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|65318239, gi|...
Organism: Bacillus anthracis str. A2012
Length: 375 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|65318239, gi|....

Description E-value Query
Range
Subject
Range
gi|118791508, gi... - gi|118791508|ref|XP_552951.2| AGAP009036-PA [Anopheles gambiae str. PEST], gi|116117635|gb|EAL39028....
AGAP009036-PA - solute carrier family 9 (sodium/hydrogen exchanger), member 3|protein_coding|3R:24426421:24457340:1|...
6.0E-57 [5..373] [248..649]
gi|32450774 - gi|32450774|gb|AAM63432.1| Na+/H+ exchanger [Aedes aegypti]
1.0E-56 [5..373] [252..653]
gi|37727744 - gi|37727744|gb|AAO34131.1| alkali metal ion/proton exchanger 3 [Anopheles gambiae]
3.0E-56 [5..373] [248..648]
gi|125987481, gi... - gi|54645835|gb|EAL34573.1| GA21648-PA [Drosophila pseudoobscura], gi|125987481|ref|XP_001357503.1| G...
9.0E-55 [5..373] [194..597]
Nhe2-PB, Nhe2-PA - The gene Na<sup>+</sup>/H<sup>+</sup> hydrogen exchanger 2 is referred to in FlyBase by the symbol D...
1.0E-54 [5..373] [197..600]

Back

Predicted Domain #1
Region A:
Residues: [1-232]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFYFELVVI LLCTKLAGDI SVRLGQPSVL GKLIVGIIIG PAVLGIINSS ELIDELSEIG  60
   61 VLLLMFMAGL ETDLEELNRN LKSSFAVAAG GIIFPFIGGY VTGLLFGLIQ SHAIFLGLLL 120
  121 CATSVSITVQ TLRDLGKMNT RESTTILGAA VFDDVIVVIL LAFVMSFLGT QDVNITLVIV 180
  181 KKIIFFVSIV FIAWKVVPWI MKMLVPLRVT EALISAALII CFSFSYYSEM MG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [233-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IAGIIGAFAA GIAISQTEYK HEVEHKIEPI AYAIFVPVFF VSIGMEITFQ GIGSQLWFII  60
   61 IMTLIAIFTK LIGSGLGARL TGFNLQSSIS IGAGMVSRGE VALIIAANGL AANLLAKENF 120
  121 TAIVIVVILT TIITPPLLKK YFV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle