YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30262405, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	217 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262405, gi|....

Description	E-value	Query Range	Subject Range
gi\|163862379, gi... - gi\|89208236\|ref\|ZP_01186752.1\| Beta-lactamase-like [Bacillus weihenstephanensis KBAB4], gi\|89153822\|...	8.0E-39	[1..217]	[1..217]
gi\|30020471, gi\|... - gi\|30020471\|ref\|NP_832102.1\| metal-dependent hydrolase [Bacillus cereus ATCC 14579], gi\|29896022\|gb\|...	3.0E-38	[1..217]	[1..217]
gi\|42737425, gi\|... - gi\|42781502\|ref\|NP_978749.1\| hydrolase, putative [Bacillus cereus ATCC 10987], gi\|42737425\|gb\|AAS413...	5.0E-38	[1..217]	[1..217]
gi\|52143077, gi\|... - gi\|52143077\|ref\|YP_083752.1\| metal-dependent hydrolase [Bacillus cereus E33L], gi\|51976546\|gb\|AAU180...	8.0E-38	[1..217]	[1..217]
gi\|74490998, gi\|... - gi\|75761518\|ref\|ZP_00741479.1\| Metal-dependent hydrolase [Bacillus thuringiensis serovar israelensis... gi\|228858692, gi... - gi\|228900994\|ref\|ZP_04065207.1\| Metal-dependent hydrolase [Bacillus thuringiensis IBL 4222], gi\|2288...	1.0E-37	[1..217]	[1..217]
gi\|149904601, gi... - gi\|82748436\|ref\|ZP_00910920.1\| Zn-dependent hydrolases, glyoxylase family [Clostridium beijerincki N...	2.0E-35	[1..217]	[1..229]
gi\|25500591 - pir\|\|G97070 Zn-dependent hydrolases, glyoxylase family [imported] - Clostridium acetobutylicum gi\|15894665, gi\|... - gi\|15894665\|ref\|NP_348014.1\| zinc-dependent hydrolase [Clostridium acetobutylicum ATCC 824], gi\|1502...	4.0E-34	[1..217]	[1..241]
gi\|46199561, gi\|... - gi\|46199561\|ref\|YP_005228.1\| hydrolase [Thermus thermophilus HB27], gi\|46197187\|gb\|AAS81601.1\| proba...	3.0E-30	[7..213]	[1..195]
gi\|53731235, gi\|... - gi\|91773724\|ref\|YP_566416.1\| beta-lactamase-like protein [Methanococcoides burtonii DSM 6242], gi\|91...	1.0E-29	[1..215]	[1..201]
gi\|147921257, gi... - gi\|147921257\|ref\|YP_684929.1\| hypothetical protein RCIX100 [uncultured methanogenic archaeon RC-I], ...	1.0E-29	[7..215]	[1..196]

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Predicted Domain #1

Region A:
Residues: [1-217]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIAKGVEML QLEFQEFIIH PILLWNDEMA VLIDTGFPGQ FEDIQVEMKR VGVSVDKLKV  60
   61 VILTHQDIDH IGSLPDLLEN GVSDIKVYAH ELDKRYIEGD LPLLKDVHVE NPPKGKVSDT 120
  121 VIDGQELPYC GGILILHTPG HTPGHISLYL KQSKTLIAGD SMYSVNGKLG GIHAPTTLNI 180
  181 MEAQQSLKKY LNLDIESVVC YHGGLSKGNI KIQLQNL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	24.154902
Match:	1smlA
Description:	Zn metallo-beta-lactamase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.31184084417389	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: