YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30263073, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	70 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30263073, gi|....

Description	E-value	Query Range	Subject Range
SAS2_BACME - Small, acid-soluble spore protein C2 OS=Bacillus megaterium GN=SASP-C2 PE=3 SV=1	105.0	[0..1]	[70..1]
gi\|56911410, gi\|... - gi\|56965166\|ref\|YP_176898.1\| small acid-soluble spore protein [Bacillus clausii KSM-K16], gi\|5691141...	103.0	[0..3]	[67..1]
gi\|52142406, gi\|... - gi\|52142406\|ref\|YP_084421.1\| small, acid-soluble spore protein [Bacillus cereus E33L], gi\|51975875\|g...	102.0	[0..1]	[70..1]
gi\|3688809 - gi\|3688809\|gb\|AAC62407.1\| SspA [Bacillus firmus]	102.0	[0..3]	[69..1]
SSPB_BACSU - Small, acid-soluble spore protein B OS=Bacillus subtilis (strain 168) GN=sspB PE=3 SV=1 gi\|221322334 - gi\|221322334\|ref\|ZP_03603628.1\| small acid-soluble spore protein (beta-type SASP) [Bacillus subtilis... gi\|221318060 - gi\|221318060\|ref\|ZP_03599354.1\| small acid-soluble spore protein (beta-type SASP) [Bacillus subtilis... SAS2_BACSU, SSPB... - Small, acid-soluble spore protein B OS=Bacillus subtilis GN=sspB PE=3 SV=1, (P04832) Small, acid-sol... gi\|221313136 - gi\|221313136\|ref\|ZP_03594941.1\| small acid-soluble spore protein (beta-type SASP) [Bacillus subtilis...	102.0	[0..3]	[69..1]
gi\|118477439, gi... - gi\|118477439\|ref\|YP_894590.1\| small, acid-soluble spore protein [Bacillus thuringiensis str. Al Haka... gi\|51976904, gi\|... - gi\|52143435\|ref\|YP_083396.1\| small acid-soluble spore protein [Bacillus cereus E33L], gi\|51976904\|gb... gi\|49178783, gi\|... - gi\|49184856\|ref\|YP_028108.1\| small acid-soluble spore protein alpha/beta family protein [Bacillus an... gi\|49332763, gi\|... - gi\|49481207\|ref\|YP_036150.1\| small acid-soluble spore protein [Bacillus thuringiensis serovar konkuk... gi\|30020123, gi\|... - gi\|30020123\|ref\|NP_831754.1\| small acid-soluble spore protein [Bacillus cereus ATCC 14579], gi\|29895...	102.0	[0..1]	[70..1]
SAS1_BACIU - Small, acid-soluble spore protein 1 OS=Bacillus subtilis PE=1 SV=2	101.0	[0..2]	[69..3]
gi\|42782199, gi\|... - gi\|42782199\|ref\|NP_979446.1\| small, acid-soluble spore protein [Bacillus cereus ATCC 10987], gi\|4273... gi\|228793625, gi... - gi\|228966067\|ref\|ZP_04127131.1\| Small, acid-soluble spore protein B [Bacillus thuringiensis serovar ... gi\|228921801, gi... - gi\|228921801\|ref\|ZP_04085116.1\| Small, acid-soluble spore protein B [Bacillus thuringiensis serovar ... gi\|228908868, gi... - gi\|228908868\|ref\|ZP_04072699.1\| Small, acid-soluble spore protein B [Bacillus thuringiensis IBL 200]...	101.0	[0..1]	[70..1]

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Predicted Domain #1

Region A:
Residues: [1-70]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNNNSGSSN QLLVRGAEQA LDQMKYEIAQ EFGVQLGADA TARANGSVGG EITKRLVSLA  60
   61 EQQLGGGVTR

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	36.508638
Match:	PF00269.11
Description:	No description for PF00269.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits