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View Structure Prediction Details

Protein: gi|30262947, gi|...
Organism: Bacillus anthracis str. Ames
Length: 397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262947, gi|....

Description E-value Query
Range
Subject
Range
gi|50752715 - gi|50752715|ref|XP_413724.1| PREDICTED: similar to Na+-dependent purine-selective nucleoside transpo...
0.0 [2..395] [785..1198]
S28A2_MOUSE - Sodium/nucleoside cotransporter 2 OS=Mus musculus GN=Slc28a2 PE=1 SV=2
0.0 [2..395] [174..587]
SLC28A1 - solute carrier family 28 (sodium-coupled nucleoside transporter), member 1
0.0 [2..395] [177..590]
gi|114658654 - gi|114658654|ref|XP_510563.2| PREDICTED: solute carrier family 28 (sodium-coupled nucleoside transpo...
0.0 [2..395] [177..590]
S28A1_RABIT - Sodium/nucleoside cotransporter 1 OS=Oryctolagus cuniculus GN=SLC28A1 PE=2 SV=1
0.0 [2..395] [172..585]

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Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFILNMLGI FVVILIVYLC SPNKKHIKWR PIVILIILEL FITWFMLGTK LGSIIINKIA  60
   61 SFFSWLLACA NEGIRFAFPS AMENQTIDFF FSALLPIIFV ITFFDILSYF GILTWIIDKV 120
  121 GAVISKISRL PKLESFFSIQ MMFLGN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 33.455932
Match: PF01773.11
Description: No description for PF01773.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [147-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TEALAVVRDQ LSVLKENRLL TFGIMSMSSV SGSILGAYLS MVPATYIFSA IPLNCINALI  60
   61 LANVLNPVEV SKEEDVV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [224-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YTPSKHEKKD FFSTISNSML VGMNMVIVIL AMVIGYVALT ACLNGILGFF VTGLTIQKIF  60
   61 SIIFSPFAFL LGLSGSDAMY VAELMGIKIT TNEFVAMMDL KSNLKSLQPH TVAVATTFLA 120
  121 SFANFSTVGM IYGTYNSLFG GEKSSVIGKN VWKLLVSGMA VSLLSAMLVG LFVW

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle