YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30261348, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	397 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30261348, gi|....

Description	E-value	Query Range	Subject Range
gi\|86605059 - gi\|86605059\|ref\|YP_473822.1\| tryptophan synthase, beta subunit [Cyanobacteria bacterium Yellowstone ... gi\|86553601, gi\|... - gi\|86605059\|ref\|YP_473822.1\| tryptophan synthase subunit beta [Synechococcus sp. JA-3-3Ab], gi\|86553...	0.0	[6..396]	[3..393]
gi\|71739840, gi\|... - gi\|71839674\|ref\|ZP_00679418.1\| Tryptophan synthase, beta chain [Pelobacter propionicus DSM 2379], gi...	0.0	[4..395]	[2..393]
gi\|145588957, gi... - gi\|145588957\|ref\|YP_001155554.1\| tryptophan synthase subunit beta [Polynucleobacter necessarius subs...	0.0	[3..395]	[2..394]
gi\|86608975 - gi\|86608975\|ref\|YP_477737.1\| tryptophan synthase, beta subunit [Cyanobacteria bacterium Yellowstone ... TRPB_SYNJB - Tryptophan synthase beta chain OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=trpB PE=3 SV=1	0.0	[6..396]	[22..420]
gi\|77970857, gi\|... - gi\|78062972\|ref\|YP_372880.1\| tryptophan synthase subunit beta [Burkholderia sp. 383], gi\|77970857\|gb...	0.0	[3..392]	[2..391]
TRPB_BACCR - Tryptophan synthase beta chain OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 1530...	0.0	[1..397]	[1..397]
TRPB_BACWK - Tryptophan synthase beta chain OS=Bacillus weihenstephanensis (strain KBAB4) GN=trpB PE=3 SV=1	0.0	[1..397]	[1..397]
TRPB_OCEIH - Tryptophan synthase beta chain OS=Oceanobacillus iheyensis GN=trpB PE=3 SV=1 TRPB_OCEIH - Tryptophan synthase beta chain OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954...	0.0	[2..395]	[3..396]
gi\|47569175, gi\|... - gi\|47569175\|ref\|ZP_00239862.1\| tryptophan synthase, beta subunit [Bacillus cereus G9241], gi\|4755414...	0.0	[1..397]	[1..397]
TRPB_BACC1 - Tryptophan synthase beta chain OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=trpB PE=3 SV=1	0.0	[1..397]	[1..397]

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Predicted Domain #1

Region A:
Residues: [1-397]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYAYPDEKG HYGIYGGRYV PETLMQSVLE LEEAYKEAME DEAFQKELNH YLKTYVGRET  60
   61 PLYFAENMTE YCGGAKIYLK REDLNHTGAH KINNTIGQAL LAVRMGKKKV VAETGAGQHG 120
  121 VATATVCALL GLECVIFMGE EDVRRQKLNV FRMELLGAKV ESVAAGSGTL KDAVNEALRY 180
  181 WVSHVHDTHY IMGSVLGPHP FPQIVRDFQS VIGNETKKQY EALEGKLPEA VVACIGGGSN 240
  241 AMGMFYPFVH DEEVALYGVE AAGKGVHTEK HAATLTKGSV GVLHGSMMYL LQNEEGQIQE 300
  301 AHSISAGLDY PGVGPEHSLL KDIGRVSYHS ITDDEALEAF QLLTKKEGII PALESSHAVA 360
  361 YALKLAPQMK EDEGLVICLS GRGDKDVESI KRYMEEV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	114.0
Match:	1x1qA
Description:	No description for 1x1qA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits