YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260094, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	433 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260094, gi|....

Description	E-value	Query Range	Subject Range
gi\|53830059 - gi\|53830059\|gb\|AAU94938.1\| anchor protein [Homo sapiens]	1.0E-56	[22..415]	[3494..3924]
gi\|73949214 - gi\|73949214\|ref\|XP_535207.2\| PREDICTED: similar to Solute carrier family 23, member 1 (Sodium-depend...	1.0E-52	[4..431]	[216..699]
gi\|109471911 - gi\|109471911\|ref\|XP_231601.4\| PREDICTED: similar to Solute carrier family 23 member 1 (Sodium-depend...	2.0E-52	[1..431]	[154..668]
gi\|41326541, gi\|... - gi\|62391201\|ref\|YP_226603.1\| xanthine/uracil permease [Corynebacterium glutamicum ATCC 13032], gi\|41...	2.0E-52	[2..430]	[30..458]
gi\|221256304, gi... - gi\|50759510\|ref\|XP_417671.1\| PREDICTED: similar to Solute carrier family 23, member 2 (Sodium-depend...	4.0E-52	[4..431]	[105..587]
gi\|109092775 - gi\|109092775\|ref\|XP_001115608.1\| PREDICTED: solute carrier family 23 (nucleobase transporters), memb...	4.0E-52	[4..431]	[96..572]
gi\|68343719, gi\|... - gi\|70729420\|ref\|YP_259158.1\| xanthine/uracil permease family protein [Pseudomonas fluorescens Pf-5],...	4.0E-52	[2..429]	[132..556]
gi\|114680794 - gi\|114680794\|ref\|XP_001164707.1\| PREDICTED: solute carrier family 23 (nucleobase transporters), memb...	5.0E-52	[4..431]	[96..573]
gi\|25028823, gi\|... - gi\|25028823\|ref\|NP_738877.1\| putative purine permease [Corynebacterium efficiens YS-314], gi\|2349410...	5.0E-52	[2..430]	[15..443]
SVC2_MOUSE, S23A... - (Q9EPR4) Solute carrier family 23, member 2 (Sodium-dependent vitamin C transporter 2) (mSVCT2) (Na(...	6.0E-52	[4..431]	[96..576]

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Predicted Domain #1

Region A:
Residues: [1-207]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEVDIMKTF LSALQWALFI LAGSLIVPIS VATSYGLDGA EAIAFVQRTL FVLGFAGLLQ  60
   61 AIFGHKLPIQ EGPAGLWWGI FSLYASLGVV LFGSSNETLK VLQYAFLLSG IICIILSVFG 120
  121 LIDKLVRYFT PTVIGTYLFL LVAQLSGAFL KGMFGLDGQH TEVQADVFIL SLIVILLSFF 180
  181 IMKLPIIGQY SVLFSIVCGW ILFACFG

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [208-269]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSNPITPVTD IIRLPSLFVF GMPRIEWNMA ITVVFVTLLL LTNMLASIRV VQKVVSKYEE  60
   61 NA

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [270-433]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPDRFKQAGI ITGINQLLGG LFSAIGPVAI SGSAGFIATT NIYKRLPFML GSSFIIVVSI  60
   61 FPKITSFFAA IPVAVGYAAI YPVFASMIGL AFREYDTVQN KERLFKVAGL SIFTGVGVMF 120
  121 VPAGAFSTLP PFLASFLSNG LVLGSVMAIL LEILFSRSTE KQLS

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits