YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30259340, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	371 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259340, gi|....

Description	E-value	Query Range	Subject Range
gi\|69275084, gi\|... - gi\|69275084\|ref\|ZP_00610996.1\| Citrate synthase I [Mesorhizobium sp. BNC1], gi\|68193524\|gb\|EAN08176....	0.0	[2..371]	[42..429]
gi\|17982781, gi\|... - gi\|17987119\|ref\|NP_539753.1\| citrate synthase [Brucella melitensis 16M], gi\|17982781\|gb\|AAL52017.1\| ... gi\|25291252 - pir\|\|AF3356 citrate (si)-synthase (EC 4.1.3.7) [imported] - Brucella melitensis (strain 16M) gi\|225627616, gi... - gi\|225627616\|ref\|ZP_03785653.1\| citrate synthase I [Brucella ceti str. Cudo], gi\|225617621\|gb\|EEH146...	0.0	[2..371]	[49..436]
gi\|23502026, gi\|... - gi\|23502026\|ref\|NP_698153.1\| type II citrate synthase [Brucella suis 1330], gi\|23347979\|gb\|AAN30068.... gi\|161511146 - gi\|161511146\|ref\|NP_539753.2\| type II citrate synthase [Brucella melitensis 16M] gi\|254719211 - gi\|254719211\|ref\|ZP_05181022.1\| type II citrate synthase [Brucella sp. 83/13] gi\|161619100, gi... - gi\|161619100\|ref\|YP_001592987.1\| type II citrate synthase [Brucella canis ATCC 23365], gi\|161335911\|... gi\|254714219 - gi\|254714219\|ref\|ZP_05176030.1\| type II citrate synthase [Brucella ceti M644/93/1] gi\|254717655 - gi\|254717655\|ref\|ZP_05179466.1\| type II citrate synthase [Brucella ceti M13/05/1] gi\|225852646, gi... - gi\|225852646\|ref\|YP_002732879.1\| citrate synthase I [Brucella melitensis ATCC 23457], gi\|225641011\|g... gi\|254706669 - gi\|254706669\|ref\|ZP_05168497.1\| type II citrate synthase [Brucella pinnipedialis M163/99/10] gi\|254710223 - gi\|254710223\|ref\|ZP_05172034.1\| type II citrate synthase [Brucella pinnipedialis B2/94] gi\|254701889 - gi\|254701889\|ref\|ZP_05163717.1\| type II citrate synthase [Brucella suis bv. 5 str. 513] gi\|254704435 - gi\|254704435\|ref\|ZP_05166263.1\| type II citrate synthase [Brucella suis bv. 3 str. 686]	0.0	[2..371]	[42..429]
gi\|82616088 - gi\|82616088\|emb\|CAJ11126.1\| Citrate synthase [Brucella melitensis biovar Abortus 2308] gi\|254689372 - gi\|254689372\|ref\|ZP_05152626.1\| type II citrate synthase [Brucella abortus bv. 6 str. 870] gi\|189024301, gi... - gi\|189024301\|ref\|YP_001935069.1\| Citrate synthase [Brucella abortus S19], gi\|189019873\|gb\|ACD72595.1... gi\|254730402 - gi\|254730402\|ref\|ZP_05188980.1\| type II citrate synthase [Brucella abortus bv. 4 str. 292] gi\|254693856 - gi\|254693856\|ref\|ZP_05155684.1\| type II citrate synthase [Brucella abortus bv. 3 str. Tulya] gi\|254697505 - gi\|254697505\|ref\|ZP_05159333.1\| type II citrate synthase [Brucella abortus bv. 2 str. 86/8/59] gi\|62290061, gi\|... - gi\|62290061\|ref\|YP_221854.1\| type II citrate synthase [Brucella abortus bv. 1 str. 9-941], gi\|621961... gi\|82699987 - gi\|82699987\|ref\|YP_414561.1\| type II citrate synthase [Brucella melitensis biovar Abortus 2308]	0.0	[2..371]	[42..429]
gi\|26245393 - gi\|26245393\|gb\|AAN77499.1\| citrate synthase [Sinorhizobium fredii]	0.0	[2..371]	[42..429]
CISY_BARHE - Citrate synthase OS=Bartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1) GN=gltA PE=3 SV=... CISY_BARHE - Citrate synthase OS=Bartonella henselae GN=gltA PE=3 SV=1	0.0	[2..371]	[42..429]
CISY2_RHITR - Citrate synthase, plasmid OS=Rhizobium tropici GN=pcsA PE=3 SV=1	0.0	[2..371]	[42..429]
gi\|13470829, gi\|... - gi\|14021572\|dbj\|BAB48184.1\| citrate synthase [Mesorhizobium loti MAFF303099], gi\|13470829\|ref\|NP_102...	0.0	[2..371]	[46..433]
gi\|86281649, gi\|... - gi\|86357547\|ref\|YP_469439.1\| type II citrate synthase [Rhizobium etli CFN 42], gi\|86281649\|gb\|ABC907...	0.0	[2..371]	[42..429]
CISY_RHIME - Citrate synthase OS=Rhizobium meliloti GN=gltA PE=3 SV=2 CISY_RHIME - Citrate synthase OS=Rhizobium meliloti (strain 1021) GN=gltA PE=3 SV=2	0.0	[2..371]	[42..429]

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Predicted Domain #1

Region A:
Residues: [1-371]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVIRGLEGV VATTSSVSSI IDDTLTYAGY NIDDLAENAT FEEVVYLLWH RKLPNEQELA  60
   61 KFNEIVSEYY KVPGEILAYL KQVDLKIAHP MSVLRTAISM LSLYDESAEI MDEKSNYLKA 120
  121 VKLQAQVGTL VAAYARIRKG LDVVEPRNDL SLAANFLYML NDREPNEVEI EAFDKALVLH 180
  181 ADHELNASTF TARVCVATLS DVYSGITAAI GALKGPLHGG ANENVMKMLT EIGEEENVES 240
  241 YIHNALQNKV KIMGFGHRVY EQGDPRAKHL REMSKRLCVL LGEEKWYNMS IKIEDIVTKE 300
  301 KGLPPNVDFY SASVYHCLGI DHDLFTPIFA ISRMSGWLAH ILEQYENNRL IRPRADYNGP 360
  361 THQVYVPIAQ R

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	124.0
Match:	1vgpA
Description:	Crystal Structure of an Isozyme of Citrate Synthase from Sulfolbus tokodaii strain7
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits