YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30263739, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	335 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30263739, gi|....

Description	E-value	Query Range	Subject Range
gi\|67987421, gi\|... - gi\|69285730\|ref\|ZP_00617069.1\| transport system permease protein [Kineococcus radiotolerans SRS30216...	1.0E-58	[30..330]	[580..881]
gi\|76167036, gi\|... - gi\|76257950\|ref\|ZP_00765607.1\| transport system permease protein [Chloroflexus aurantiacus J-10-fl],...	3.0E-54	[3..332]	[60..390]
FHUB_BACSU - Iron(3+)-hydroxamate import system permease protein fhuB OS=Bacillus subtilis GN=fhuB PE=3 SV=1 FHUB_BACSU - Iron(3+)-hydroxamate import system permease protein FhuB OS=Bacillus subtilis (strain 168) GN=fhuB P...	5.0E-53	[8..331]	[59..382]
gi\|83375265, gi\|... - gi\|83375265\|ref\|ZP_00920028.1\| similar to ABC-type Fe3+-siderophore transport system permease compon...	1.0E-51	[22..331]	[440..745]
gi\|29898974, gi\|... - gi\|30023413\|ref\|NP_835044.1\| ferrichrome transport system permease protein fhuB [Bacillus cereus ATC... gi\|228652969, gi... - gi\|229130630\|ref\|ZP_04259586.1\| Ferrichrome transport system permease protein fhuB [Bacillus cereus ...	5.0E-51	[1..333]	[18..350]
gi\|228791221, gi... - gi\|228968515\|ref\|ZP_04129503.1\| Ferrichrome transport system permease protein fhuB [Bacillus thuring... gi\|228942529, gi... - gi\|228942529\|ref\|ZP_04105064.1\| Ferrichrome transport system permease protein fhuB [Bacillus thuring... gi\|228777633, gi... - gi\|228982095\|ref\|ZP_04142387.1\| Ferrichrome transport system permease protein fhuB [Bacillus thuring... gi\|228975462, gi... - gi\|228975462\|ref\|ZP_04136017.1\| Ferrichrome transport system permease protein fhuB [Bacillus thuring... gi\|229082595, gi... - gi\|229082595\|ref\|ZP_04215058.1\| Ferrichrome transport system permease protein fhuB [Bacillus cereus ... gi\|228710341, gi... - gi\|229072850\|ref\|ZP_04206049.1\| Ferrichrome transport system permease protein fhuB [Bacillus cereus ... gi\|228589788, gi... - gi\|229193635\|ref\|ZP_04320578.1\| Ferrichrome transport system permease protein fhuB [Bacillus cereus ... gi\|228601826, gi... - gi\|229181630\|ref\|ZP_04308955.1\| Ferrichrome transport system permease protein fhuB [Bacillus cereus ... gi\|74493983, gi\|... - gi\|75758549\|ref\|ZP_00738669.1\| Ferrichrome transport system permease protein fhuB [Bacillus thuringi... gi\|218900510, gi... - gi\|218900510\|ref\|YP_002448921.1\| iron compound ABC transporter, permease protein [Bacillus cereus G9... gi\|206735085, gi... - gi\|206970508\|ref\|ZP_03231461.1\| iron compound ABC transporter, permease protein [Bacillus cereus AH1... gi\|228855770, gi... - gi\|228903861\|ref\|ZP_04067976.1\| Ferrichrome transport system permease protein fhuB [Bacillus thuring...	6.0E-51	[1..333]	[18..350]
gi\|52005036, gi\|... - gi\|52787212\|ref\|YP_093041.1\| FhuB [Bacillus licheniformis ATCC 14580], gi\|52349714\|gb\|AAU42348.1\| Fh...	1.0E-50	[4..330]	[25..351]
gi\|47570385, gi\|... - gi\|47570385\|ref\|ZP_00241026.1\| ferrichrome transport permease fhuB [Bacillus cereus G9241], gi\|47552...	1.0E-50	[1..333]	[18..350]
gi\|228841659, gi... - gi\|228917994\|ref\|ZP_04081526.1\| Ferrichrome transport system permease protein fhuB [Bacillus thuring... gi\|49330536, gi\|... - gi\|49478980\|ref\|YP_039373.1\| ferrichrome ABC transporter, permease [Bacillus thuringiensis serovar k... gi\|228658592, gi... - gi\|229124884\|ref\|ZP_04254061.1\| Ferrichrome transport system permease protein fhuB [Bacillus cereus ... gi\|51973651, gi\|... - gi\|52140182\|ref\|YP_086649.1\| ferrichrome transport system, permease [Bacillus cereus E33L], gi\|51973... gi\|218538627, gi... - gi\|218906561\|ref\|YP_002454395.1\| iron compound ABC transporter, permease protein [Bacillus cereus AH... gi\|228688878, gi... - gi\|229094494\|ref\|ZP_04225563.1\| Ferrichrome transport system permease protein fhuB [Bacillus cereus ... gi\|196028184, gi... - gi\|196041016\|ref\|ZP_03108313.1\| iron compound ABC transporter, permease protein [Bacillus cereus NVH... gi\|228936668, gi... - gi\|228936668\|ref\|ZP_04099461.1\| Ferrichrome transport system permease protein fhuB [Bacillus thuring... gi\|228930389, gi... - gi\|228930389\|ref\|ZP_04093390.1\| Ferrichrome transport system permease protein fhuB [Bacillus thuring...	1.0E-50	[1..333]	[18..350]
gi\|42740489, gi\|... - gi\|42784557\|ref\|NP_981804.1\| iron compound ABC transporter, permease protein [Bacillus cereus ATCC 1... gi\|229199505, gi... - gi\|229199505\|ref\|ZP_04326166.1\| Ferrichrome transport system permease protein fhuB [Bacillus cereus ... gi\|228728301, gi... - gi\|229034020\|ref\|ZP_04188969.1\| Ferrichrome transport system permease protein fhuB [Bacillus cereus ... gi\|221242913, gi... - gi\|222098854\|ref\|YP_002532912.1\| ferrichrome ABC transporter, permease [Bacillus cereus Q1], gi\|2212...	2.0E-50	[1..333]	[18..350]

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Predicted Domain #1

Region A:
Residues: [1-335]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKTNAVPVT ILCIAPVLIL FTVILSVLYG AKNIDAQTVW NALFHFDSSD VNHNIIITSR  60
   61 LPRVVAALLV GAFLAISGAL MQGMTRNYLA SPSIMGVTDG AAFVITLCMI FLPGMSSIGM 120
  121 VVCSMIGSAL GAGIVFGFGS LLQNGLSPVR LAIIVTVIGT FLSSVSAAMA SYFQISQNVS 180
  181 FWFNAKLDQV DPNIIKITIP FGIIGIVLVL LISKSITILS LGEEVSINLG QRTKLVKAMA 240
  241 ILSVIFLTGT AVALVGKVGF VGLIIPHITR FIIGVDYKWI LPCAGVIGGV FLALCDILSR 300
  301 FVNYPFETPI GVVTSLIGIP FFLYLIRTRG GERHA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	39.154902
Match:	2nq2A
Description:	No description for 2nq2A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits