YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258365, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	303 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258365, gi|....

Description	E-value	Query Range	Subject Range
gi\|28203058, gi\|... - gi\|28210620\|ref\|NP_781564.1\| ribokinase [Clostridium tetani E88], gi\|28203058\|gb\|AAO35501.1\| ribokin...	2.0E-59	[2..297]	[5..306]
gi\|152976111, gi... - gi\|89202201\|ref\|ZP_01180930.1\| 1-phosphofructokinase [Bacillus cereus subsp. cytotoxis NVH 391-98], ...	4.0E-58	[1..303]	[1..303]
gi\|52141769, gi\|... - gi\|52141769\|ref\|YP_085059.1\| 1-phosphofructokinase [Bacillus cereus E33L], gi\|51975238\|gb\|AAU16788.1...	3.0E-57	[1..303]	[1..303]
gi\|75762785, gi\|... - gi\|75762785\|ref\|ZP_00742611.1\| 1-phosphofructokinase [Bacillus thuringiensis serovar israelensis ATC... gi\|218543021, gi... - gi\|218898815\|ref\|YP_002447226.1\| 1-phosphofructokinase [Bacillus cereus G9842], gi\|218543021\|gb\|ACK9...	5.0E-57	[1..303]	[1..303]
gi\|50903100, gi\|... - gi\|50914026\|ref\|YP_059998.1\| 1-phosphofructokinase [Streptococcus pyogenes MGAS10394], gi\|50903100\|g... gi\|19748084, gi\|... - gi\|19748084\|gb\|AAL97563.1\| putative fructose-1-phosphate kinase [Streptococcus pyogenes MGAS8232], g... gi\|134272220, gi... - gi\|139473973\|ref\|YP_001128689.1\| putative 1-phosphofructokinase [Streptococcus pyogenes str. Manfred...	6.0E-57	[1..303]	[1..303]
gi\|49329895, gi\|... - gi\|49478339\|ref\|YP_037783.1\| 1-phosphofructokinase [Bacillus thuringiensis serovar konkukian str. 97...	8.0E-57	[1..303]	[1..303]
gi\|71910474, gi\|... - gi\|71910474\|ref\|YP_282024.1\| 1-phosphofructokinase [Streptococcus pyogenes MGAS5005], gi\|71853256\|gb... gi\|15674887, gi\|... - gi\|15674887\|ref\|NP_269061.1\| putative fructose-1-phosphate kinase [Streptococcus pyogenes M1 GAS], g...	1.0E-56	[1..303]	[1..303]
gi\|94990229, gi\|... - gi\|94990229\|ref\|YP_598329.1\| 1-phosphofructokinase [Streptococcus pyogenes MGAS10270], gi\|94543737\|g...	1.0E-56	[1..303]	[1..303]
gi\|71802403, gi\|... - gi\|71903308\|ref\|YP_280111.1\| 1-phosphofructokinase [Streptococcus pyogenes MGAS6180], gi\|71802403\|gb...	1.0E-56	[1..303]	[1..303]
gi\|209559214, gi... - gi\|209559214\|ref\|YP_002285686.1\| Tagatose-6-phosphate kinase / 1- phosphofructokinase [Streptococcus... gi\|56807916 - gi\|56807916\|ref\|ZP_00365741.1\| COG1105: Fructose-1-phosphate kinase and related fructose-6-phosphate...	1.0E-56	[1..303]	[1..303]

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Predicted Domain #1

Region A:
Residues: [1-303]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYTVTLNPS IDYVVQVNSL DLGAVNRAEK DMKFPGGKGI NVSRVLHRLG VENVALGFTG  60
   61 GFTGRFIKDV LQTEGVITNF VQVDGDSRIN VKIKGQEETE LNGQGPSVTN EQFEQLMKQI 120
  121 ESMQKGDYVV LAGSVPASIP TTFYESIAAF GAEKGIRVVV DASGSALQHV VKNKPFLIKP 180
  181 NHHELGELFG VEISTAEDIL PYGRKLIEQG VEHVIVSMAG DGALLFTAEG IYEATVPKGV 240
  241 VINSVGAGDS LVAGFVGKYE QTKDIEKAFQ YGVATGSATA FSADLCEKEK VEELLSQVIV 300
  301 TKR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	54.39794
Match:	2abqA
Description:	Crystal structure of fructose-1-phosphate kinase from Bacillus halodurans
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	2.11518580948187	bayes_pls_golite062009
carbohydrate kinase activity	1.99025603598964	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	1.69918601153494	bayes_pls_golite062009
transferase activity	1.65599843675995	bayes_pls_golite062009
kinase activity	1.6060752218324	bayes_pls_golite062009
ribokinase activity	0.51718258191684	bayes_pls_golite062009
phosphofructokinase activity	0.14502182066038	bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor	0.143446029424335	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: