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View Structure Prediction Details

Protein: gi|30262955, gi|...
Organism: Bacillus anthracis str. Ames
Length: 319 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262955, gi|....

Description E-value Query
Range
Subject
Range
gi|45385321 - gi|45385321|gb|AAM77643.2|AF517831_1 chloroplast omega-3 desaturase [Prunus persica]
1.0E-67 [2..312] [120..448]
FAD3C_RICCO - Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1
3.0E-67 [2..308] [129..453]
gi|45385976 - gi|45385976|gb|AAS59833.1| chloroplast omega-3 desaturase [Malus x domestica]
9.0E-67 [2..312] [110..438]
gi|110084514 - gi|110084514|gb|ABG49414.1| chloroplast omega-3 fatty acid desaturase [Jatropha curcas]
6.0E-66 [2..305] [126..447]
gi|227455386 - gi|227455386|gb|ACP39503.1| delta-12 oleate desaturase [Brassica napus]
gi|46518253, gi|... - gi|46518253|emb|CAG26981.1| fatty acid desaturase 2 [Brassica rapa], gi|20520624|emb|CAD30827.1| fat...
1.0E-65 [4..296] [61..371]
gi|8705229 - gi|8705229|gb|AAF78778.1| delta-12 oleate desaturase [Brassica napus]
1.0E-65 [4..296] [61..371]
gi|7433276, gi|2... - pir||T03029 omega-3 fatty acid desaturase (EC 1.14.99.-) FAD7 - common tobacco, gi|21668486|dbj|BAC...
5.0E-65 [2..308] [114..438]
FAD6E_ARATH - Delta(12)-fatty-acid desaturase OS=Arabidopsis thaliana GN=FAD2 PE=1 SV=1
6.0E-65 [4..295] [61..369]

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Predicted Domain #1
Region A:
Residues: [1-101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWQLINTVVP FIILWYLAYK SLSVSYLLAV VPSLLAAGFM TRIFIIFHDC THYSFFKSRR  60
   61 ANRIVGTCMG VLTLFPFDQW GHDHAIHHAT SGNLDKRGTG D

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [102-319]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IWTLTVDEYV AAPLRLRLAY RLYRNPFVMF GLGPIYVFLL KNRFNRKGAR QKERMNTYLT  60
   61 NIIIVAVVAI LCWAIGWQSF LLVHGTIFLI AGSVGIWLFY VQHTFEDSYF EEDKDWEYVK 120
  121 AAVEGSSFYK LPKILQFLTG NIGFHHVHHL SPRVPNYKLE EAHNNTLPLK NVPTITLATS 180
  181 LRSLRFRLWD EKSNNFVSFK EVKNIIKNNV SVRVKSEL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle