YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30257495, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	132 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30257495, gi|....

Description	E-value	Query Range	Subject Range
FABZ_PHOPR - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Photobacterium profundum GN=fabZ PE=3 SV=1 FABZ_PHOPR - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Photobacterium profundum (strain SS9) GN=fa...	2.0E-43	[2..131]	[12..149]
FABZ_PSEHT - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudoalteromonas haloplanktis (strain TAC ...	2.0E-43	[2..131]	[12..149]
gi\|90413540, gi\|... - gi\|90413540\|ref\|ZP_01221531.1\| (3R)-hydroxymyristoyl ACP dehydratase [Photobacterium profundum 3TCK]...	2.0E-43	[2..131]	[12..149]
gi\|91795797, gi\|... - gi\|92112707\|ref\|YP_572635.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Chromohalobacter salexigens DSM ...	3.0E-43	[2..131]	[7..145]
gi\|213969129, gi... - gi\|213969129\|ref\|ZP_03397268.1\| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Pseudomona... FABZ_PSESM - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. tomato (strain DC3... FABZ_PSESM - (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas syringae pv. tomato GN=fabZ ...	4.0E-43	[2..131]	[6..145]
FABZ_SHESA - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Shewanella sp. (strain ANA-3) GN=fabZ PE=3 ...	5.0E-43	[2..131]	[12..151]
gi\|114770497 - gi\|114770497\|ref\|ZP_01447987.1\| (3R)-hydroxymyristol acyl carrier protein dehydratase [alpha proteob... gi\|221133304 - gi\|221133304\|ref\|ZP_03559609.1\| 3-hydroxymyristol acyl carrier protein dehydratase [Glaciecola sp. H... gi\|114548678, gi... - gi\|114770497\|ref\|ZP_01447987.1\| (3R)-hydroxymyristol acyl carrier protein dehydratase [alpha proteob...	5.0E-43	[2..131]	[12..147]
SO1640 - (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase FABZ_SHEON - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Shewanella oneidensis (strain MR-1) GN=fabZ...	7.0E-43	[2..131]	[12..151]
FABZ_SHELP - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Shewanella loihica (strain ATCC BAA-1088 / ...	7.0E-43	[2..131]	[12..150]
FABZ_PSEU2 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. syringae (strain B... FABZ_PSE14 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas savastanoi pv. phaseolicola (st... tr\|F3G1L3\|F3G1L3... - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. pisi str. 1704B GN... gi\|237800154 - gi\|237800154\|ref\|ZP_04588615.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Pseudomonas syringae pv. oryz...	8.0E-43	[2..131]	[6..145]

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Predicted Domain #1

Region A:
Residues: [1-132]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHIKDTLPHR YPFLMIDKVK NVKQGESVTG YKLITNNEWF INDSQNHMPH MLIVEALAQL  60
   61 SAFVHTSESD GLGFLSSLDG VTFHEKAYPG DKLDLHYELT RNRRGFVLGK GTATVNNQPI 120
  121 VTIEKLLIYQ TE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	44.0
Match:	1u1zA
Description:	The Structure of (3R)-hydroxyacyl-ACP dehydratase (FabZ)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
CoA hydrolase activity	1.75530090056705	bayes_pls_golite062009
catalytic activity	1.11649534052993	bayes_pls_golite062009
thiolester hydrolase activity	0.65794221902015	bayes_pls_golite062009
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity	0.57527342054578	bayes_pls_golite062009
3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	0.57527342054578	bayes_pls_golite062009
acyl-CoA thioesterase activity	0.24094527143225	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: