YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30262801, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	298 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262801, gi|....

Description	E-value	Query Range	Subject Range
DAPA_BARBK - 4-hydroxy-tetrahydrodipicolinate synthase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN...	0.0	[3..293]	[1..290]
gi\|241906440, gi... - gi\|241906440\|ref\|ZP_04791022.1\| dihydrodipicolinate synthase [Desulfovibrio vulgaris RCH1], gi\|24188... DAPA_DESVV - 4-hydroxy-tetrahydrodipicolinate synthase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=... DAPA_DESVH - 4-hydroxy-tetrahydrodipicolinate synthase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 295...	2.0E-99	[4..293]	[3..290]
DAPA_METJA - Dihydrodipicolinate synthase OS=Methanocaldococcus jannaschii GN=dapA PE=1 SV=1 DAPA_METJA - 4-hydroxy-tetrahydrodipicolinate synthase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM ...	2.0E-98	[3..293]	[1..287]
DAPA_GEOMG - 4-hydroxy-tetrahydrodipicolinate synthase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / ...	5.0E-98	[3..291]	[1..286]
DAPA_AQUAE - Dihydrodipicolinate synthase OS=Aquifex aeolicus GN=dapA PE=1 SV=1 DAPA_AQUAE - 4-hydroxy-tetrahydrodipicolinate synthase OS=Aquifex aeolicus (strain VF5) GN=dapA PE=1 SV=1	6.0E-98	[3..291]	[1..287]
DAPA_GEOUR - 4-hydroxy-tetrahydrodipicolinate synthase OS=Geobacter uraniireducens (strain Rf4) GN=dapA PE=3 SV=1	6.0E-98	[3..293]	[1..288]
DAPA_METKA - Dihydrodipicolinate synthase OS=Methanopyrus kandleri GN=dapA PE=3 SV=1 DAPA_METKA - 4-hydroxy-tetrahydrodipicolinate synthase OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 963...	1.0E-97	[4..293]	[5..294]
DAPA_GEOSL - Dihydrodipicolinate synthase OS=Geobacter sulfurreducens GN=dapA PE=3 SV=1 DAPA_GEOSL - 4-hydroxy-tetrahydrodipicolinate synthase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127...	4.0E-97	[3..291]	[1..286]
DAP1_BACHD, DAPA... - Dihydrodipicolinate synthase 1 OS=Bacillus halodurans GN=dapA1 PE=3 SV=1, (Q9KC32) Dihydrodipicolina... DAPA1_BACHD - 4-hydroxy-tetrahydrodipicolinate synthase 1 OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 ...	7.0E-97	[7..289]	[6..286]
gi\|237815101, gi... - gi\|237815101\|ref\|ZP_04594099.1\| dihydrodipicolinate synthase [Brucella abortus str. 2308 A], gi\|2377... gi\|25291214 - gi\|25291214\|pir\|\|AG3414 dihydrodipicolinate synthase (EC 4.2.1.52) [imported] - Brucella melitensis ... gi\|17987584, gi\|... - gi\|17987584\|ref\|NP_540218.1\| dihydrodipicolinate synthase [Brucella melitensis 16M], gi\|17983290\|gb\|...	1.0E-96	[2..292]	[14..303]

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Predicted Domain #1

Region A:
Residues: [1-298]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIIKGAFPV LITPMDEFQE INWNGVKQNV NYFIEQKVAG IIINGSTGEF VSLSKEERFK  60
   61 MVETVLKEVN GRIPVIVGTA AETTKETIEF TKHAETHGAD CALIINSYYC KPKEEEIYFH 120
  121 FKEISNAVNI PIMLYNNPFT SGVDMSTELM LRIGKDCENV THIKESSGDI RKARDLVRQG 180
  181 EGAFQVFCGS EDLVMESYLV GATGWVSVAG NVVPGLVTKM YEHFQNGELE KAWEINDAIL 240
  241 PLCEFLEGSG KYVQIVKRSM ELQGQAGGPS RYPRLGLTEE EDQKLQAIIS KIAAHAAV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	100.0
Match:	2ehhA
Description:	No description for 2ehhA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits