YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30257418, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	247 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30257418, gi|....

Description	E-value	Query Range	Subject Range
gi\|51976168, gi\|... - gi\|52142699\|ref\|YP_084130.1\| N-methyl-transferase-related protein [Bacillus cereus E33L], gi\|5197616...	9.0E-46	[1..247]	[1..247]
gi\|50082998, gi\|... - gi\|50196936\|ref\|YP_052628.1\| N-methyl-transferase-related protein [Bacillus anthracis str. 'Ames Anc...	1.0E-45	[1..247]	[3..249]
gi\|196041709, gi... - gi\|196041709\|ref\|ZP_03109000.1\| N-methyl-transferase-related protein [Bacillus cereus NVH0597-99], g... gi\|49329423, gi\|... - gi\|49477867\|ref\|YP_036899.1\| N-methyl-transferase-related protein [Bacillus thuringiensis serovar ko...	3.0E-45	[1..247]	[1..247]
gi\|42737821, gi\|... - gi\|42781897\|ref\|NP_979144.1\| N-methyl-transferase-related protein [Bacillus cereus ATCC 10987], gi\|4...	4.0E-42	[1..247]	[1..247]
gi\|75762557, gi\|... - gi\|75762557\|ref\|ZP_00742412.1\| N-METHYL-TRANSFERASE [Bacillus thuringiensis serovar israelensis ATCC... gi\|228858278, gi... - gi\|228901354\|ref\|ZP_04065546.1\| hypothetical protein bthur0014_25460 [Bacillus thuringiensis IBL 422...	3.0E-41	[1..247]	[1..247]
gi\|163940562, gi... - gi\|89209111\|ref\|ZP_01187571.1\| N-methyl-transferase-related protein [Bacillus weihenstephanensis KBA...	1.0E-40	[1..247]	[1..247]
gi\|21400712, gi\|... - gi\|65320110\|ref\|ZP_00393069.1\| COG0500: SAM-dependent methyltransferases [Bacillus anthracis str. A2...	4.0E-38	[1..227]	[1..227]
gi\|23097870, gi\|... - gi\|23097870\|ref\|NP_691336.1\| N-methyl-transferase-related protein [Oceanobacillus iheyensis HTE831],...	9.0E-35	[4..245]	[2..250]
gi\|71038264, gi\|... - gi\|71065279\|ref\|YP_264006.1\| 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone...	6.0E-32	[6..214]	[155..359]
gi\|218321183, gi... - gi\|218708164\|ref\|YP_002415785.1\| ubiquinone/menaquinone biosynthesis methyltransferase [Vibrio splen... gi\|85835662, gi\|... - gi\|86146605\|ref\|ZP_01064927.1\| ubiquinone/menaquinone biosynthesis methyltransferase [Vibrio sp. MED...	3.0E-31	[6..214]	[45..249]

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Predicted Domain #1

Region A:
Residues: [1-247]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNELNVKEFY KKQFELLSYD IKNENWLKKV TKEVQEQIGY PFQTMLELGA GNGGFARAMS  60
   61 NLNVKMTTVE LVPELVMFAK EHSTNDIVIH CADFYKINFE EKFDVVSYLD GFGVGTDEEQ 120
  121 LVLLKRIHNW LKDDGCALID IYQPLYWEKA NGQEMPIYSA MRKYEYDSEN ARMLDHWWEK 180
  181 DSSNDIVTQS LRCYTIDEIS NLCAEARFSI VGIFPGGAYD FEERKYKEQA SLNECLSYRI 240
  241 KVKKSKD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	21.69897
Match:	2avnA
Description:	Crystal structure of Ubiquinone/menaquinone biosynthesis methyltransferase-related protein (tm1389) from THERMOTOGA MARITIMA at 2.35 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.857347609112816	bayes_pls_golite062009
transferase activity	0.769739415230943	bayes_pls_golite062009
transferase activity, transferring one-carbon groups	0.648175251543522	bayes_pls_golite062009
methyltransferase activity	0.646052703874729	bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity	0.00827854656426392	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: