YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30261965, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	257 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30261965, gi|....

Description	E-value	Query Range	Subject Range
gi\|89151428, gi\|... - gi\|89200602\|ref\|ZP_01179354.1\| ABC transporter related [Bacillus cereus subsp. cytotoxis NVH 391-98]...	4.0E-94	[2..257]	[6..261]
gi\|30019337, gi\|... - gi\|30019337\|ref\|NP_830968.1\| oligopeptide transport ATP-binding protein oppF [Bacillus cereus ATCC 1... gi\|218160985, gi... - gi\|218233028\|ref\|YP_002365971.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus cereus ... gi\|206967790, gi... - gi\|206967790\|ref\|ZP_03228746.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus cereus A...	5.0E-94	[2..257]	[6..261]
gi\|254682644 - gi\|254682644\|ref\|ZP_05146505.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthraci... gi\|229600091, gi... - gi\|229600091\|ref\|YP_002865714.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthrac... gi\|227815967, gi... - gi\|227815967\|ref\|YP_002815976.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthrac... gi\|164711220, gi... - gi\|165873065\|ref\|ZP_02217685.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthraci... gi\|225863138, gi... - gi\|225863138\|ref\|YP_002748516.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus cereus ... gi\|167528503, gi... - gi\|167636149\|ref\|ZP_02394454.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthraci... gi\|167641222, gi... - gi\|167641222\|ref\|ZP_02399476.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthraci... gi\|170669217, gi... - gi\|170686694\|ref\|ZP_02877914.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthraci... gi\|170126012, gi... - gi\|170709057\|ref\|ZP_02899486.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthraci... gi\|222094912, gi... - gi\|222094912\|ref\|YP_002528972.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus cereus ... gi\|177654422, gi... - gi\|177654422\|ref\|ZP_02936319.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthraci... gi\|190569140, gi... - gi\|190569140\|ref\|ZP_03022038.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthraci... gi\|196036189, gi... - gi\|196036189\|ref\|ZP_03103588.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus cereus W... gi\|196037584, gi... - gi\|196037584\|ref\|ZP_03104895.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus cereus N... gi\|196044189, gi... - gi\|196044189\|ref\|ZP_03111425.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus cereus 0... gi\|206977680, gi... - gi\|206977680\|ref\|ZP_03238572.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus cereus H... gi\|217958764, gi... - gi\|217958764\|ref\|YP_002337312.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus cereus ... gi\|218539946, gi... - gi\|218902383\|ref\|YP_002450217.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus cereus ... gi\|49331077, gi\|... - gi\|49479521\|ref\|YP_035424.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus thuringiens... gi\|52144146, gi\|... - gi\|52144146\|ref\|YP_082682.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus cereus E33L... gi\|47526459, gi\|... - gi\|47526459\|ref\|YP_017808.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthracis s... gi\|49184125, gi\|... - gi\|49184125\|ref\|YP_027377.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthracis s... gi\|21399107, gi\|... - gi\|65318562\|ref\|ZP_00391521.1\| COG4608: ABC-type oligopeptide transport system, ATPase component [Ba... gi\|30254908, gi\|... - gi\|30261294\|ref\|NP_843671.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthracis s... gi\|47554937, gi\|... - gi\|47568389\|ref\|ZP_00239090.1\| peptide ABC transporter, ATP-binding protein [Bacillus cereus G9241],... gi\|254758730 - gi\|254758730\|ref\|ZP_05210757.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthraci... gi\|254753633 - gi\|254753633\|ref\|ZP_05205669.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthraci... gi\|254740790 - gi\|254740790\|ref\|ZP_05198479.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthraci... gi\|254734062 - gi\|254734062\|ref\|ZP_05191776.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthraci... gi\|254725439 - gi\|254725439\|ref\|ZP_05187221.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus anthraci...	7.0E-94	[2..257]	[6..261]
gi\|25297027 - pir\|\|E84105 oligopeptide ABC transporter (ATP-binding protein) BH3645 [imported] - Bacillus halodura... gi\|15616207, gi\|... - gi\|15616207\|ref\|NP_244512.1\| oligopeptide ABC transporter ATP-binding protein [Bacillus halodurans C...	8.0E-94	[3..257]	[4..263]
gi\|10717147 - gi\|10717147\|gb\|AAG22038.1\|AF305387_5 OppF [Bacillus thuringiensis]	1.0E-93	[2..257]	[6..261]
gi\|42780378, gi\|... - gi\|42780378\|ref\|NP_977625.1\| oligopeptide ABC transporter, ATP-binding protein [Bacillus cereus ATCC...	1.0E-93	[2..257]	[6..261]
gi\|56963011, gi\|... - gi\|56963011\|ref\|YP_174738.1\| oligopeptide ABC transporter ATP-binding protein [Bacillus clausii KSM-...	2.0E-93	[3..257]	[5..264]
gi\|50843594, gi\|... - gi\|50843594\|ref\|YP_056821.1\| putative peptide ABC transporter, ATP-binding protein [Propionibacteriu...	3.0E-93	[3..257]	[12..272]
gi\|163861283, gi... - gi\|89204590\|ref\|ZP_01183167.1\| ABC transporter related [Bacillus weihenstephanensis KBAB4], gi\|89157...	6.0E-93	[2..257]	[6..261]
gi\|89098104, gi\|... - gi\|89098104\|ref\|ZP_01170990.1\| oligopeptide ABC transporter (ATP-binding protein) [Bacillus sp. NRRL...	9.0E-93	[2..257]	[3..259]

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Predicted Domain #1

Region A:
Residues: [1-257]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHLLETKNL SVSFGEHHVI KDVNLIVQKG KLISIIGPNG AGKTTLFNLL SGQISPTKGE  60
   61 VYFKGQEITK LSISDRTRLG IGRSFQLTNI FPELTVLENV RLSVQSFVQD YYSFFPSSAK 120
  121 FKQQVGEARR FLKTVLLQEK EHVLAKDLAH GEKRKLELAM LLALKTDVLL LDEPTAGISV 180
  181 EEVPAILQVI ENIKKHPEST IVLIEHKMDM VLGLSDHLIV LFHGELLAEG MPEEIMKDER 240
  241 VQSAYLGGLY SGTITSE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	91.0
Match:	2d62A
Description:	No description for 2d62A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits