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View Structure Prediction Details

Protein: gi|30261739, gi|...
Organism: Bacillus anthracis str. Ames
Length: 450 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30261739, gi|....

Description E-value Query
Range
Subject
Range
gi|65319008, gi|... - gi|65319008|ref|ZP_00391967.1| COG1345: Flagellar capping protein [Bacillus anthracis str. A2012], r...
4.0E-93 [1..450] [1..450]
gi|30019785, gi|... - gi|30019785|ref|NP_831416.1| flagellar capping protein [Bacillus cereus ATCC 14579], gi|29895330|gb|...
6.0E-84 [1..450] [1..458]
gi|47557040, gi|... - gi|47566123|ref|ZP_00237161.1| flagellar hook-associated protein 2 [Bacillus cereus G9241], gi|47557...
6.0E-84 [1..450] [1..460]
gi|89157129, gi|... - gi|89204832|ref|ZP_01183407.1| Flagellar hook-associated 2, C-terminal [Bacillus weihenstephanensis ...
2.0E-83 [1..450] [1..458]
gi|54308108, gi|... - gi|54308108|ref|YP_129128.1| putative flagellar hook-associated protein 2 [Photobacterium profundum ...
5.0E-81 [12..446] [1..456]
gi|49332501, gi|... - gi|49480945|ref|YP_035860.1| flagellar capping protein [Bacillus thuringiensis serovar konkukian str...
2.0E-80 [1..450] [1..456]
gi|42736753, gi|... - gi|42780833|ref|NP_978080.1| flagellar capping protein [Bacillus cereus ATCC 10987], gi|42736753|gb|...
2.0E-80 [1..450] [1..469]
gi|37525876, gi|... - gi|37525876|ref|NP_929220.1| flagellar capping protein [Photorhabdus luminescens subsp. laumondii TT...
2.0E-79 [13..445] [3..471]
FLID_XENNE - Flagellar hook-associated protein 2 OS=Xenorhabdus nematophila GN=fliD PE=3 SV=3
4.0E-79 [13..444] [3..488]
gi|90328229, gi|... - gi|90411016|ref|ZP_01219030.1| putative flagellar hook-associated protein 2 [Photobacterium profundu...
6.0E-79 [12..446] [1..456]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGALTGIDG RQQIWNLGNN MIDTSKLVEL ELQTLEMKKS PYNNQKQLLT TERNIYASMK  60
   61 KEFGSFLQIF KDLYTFKGNE KKTALSKEGF VTAQADASAI AGTYTVTIEK IAERHQITTK 120
  121 PGNKIDLDAK IGKDVTFGIN DKEVEVPKDM TYKDLVNKIN NGN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 6.251812
Match: PF02465.9
Description: No description for PF02465.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [164-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YGVSVYSLGG QLFFTSTTAG EKGAINLVDG KDGFLEEIGL VQSSIGTGGE KLFVAAHEIT  60
   61 AATNAEYTIN GIKDSSTSNK IDTIPGLVIN LEKETTEPIK ITIEDSNIKD SIDLIKKMKD 120
  121 EYNKAVSNLD LFAGENGAVQ G

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [305-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSIAFSISNA MTSIFRYSQN GKFLNDFGIQ VDKSGKMNLD EEKLKNAFKE NPETAKQFFF  60
   61 GFSGLGHQME KQLDGIFGDE GIIGKRSKSI EKQMKNLDDK IRYIDGVNKE KQQAIIDKYS 120
  121 KLESTLAELD SQLKTIKAMT KQKSDD

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.966
Match: 1x79B
Description: Crystal structure of human GGA1 GAT domain complexed with the GAT-binding domain of Rabaptin5
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle