YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|49184086, gi\|...
Organism:	Bacillus anthracis str. Sterne
Length:	204 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49184086, gi|....

Description	E-value	Query Range	Subject Range
gi\|42780324, gi\|... - gi\|42780324\|ref\|NP_977571.1\| spore germination protein GerPC [Bacillus cereus ATCC 10987], gi\|427362...	5.0E-87	[1..204]	[1..204]
gi\|118415956, gi... - gi\|118476731\|ref\|YP_893882.1\| spore germination protein PC [Bacillus thuringiensis str. Al Hakam], g... gi\|228932522, gi... - gi\|228932522\|ref\|ZP_04095403.1\| spore germination protein gerPC [Bacillus thuringiensis serovar anda... gi\|225863098, gi... - gi\|225863098\|ref\|YP_002748476.1\| spore germination protein GerPC [Bacillus cereus 03BB102], gi\|22578... gi\|196044345, gi... - gi\|196044345\|ref\|ZP_03111581.1\| spore germination protein GerPC [Bacillus cereus 03BB108], gi\|196024... gi\|52144181, gi\|... - gi\|52144181\|ref\|YP_082645.1\| spore germination protein PC [Bacillus cereus E33L], gi\|51977650\|gb\|AAU... gi\|196037496, gi... - gi\|196037496\|ref\|ZP_03104807.1\| spore germination protein GerPC [Bacillus cereus NVH0597-99], gi\|196... gi\|229183449, gi... - gi\|229183449\|ref\|ZP_04310674.1\| spore germination protein gerPC [Bacillus cereus BGSC 6E1], gi\|22860...	5.0E-85	[1..204]	[1..204]
gi\|49480891, gi\|... - gi\|49480891\|ref\|YP_035383.1\| spore germination protein PC [Bacillus thuringiensis serovar konkukian ... gi\|218902343, gi... - gi\|218902343\|ref\|YP_002450177.1\| spore germination protein GerPC [Bacillus cereus AH820], gi\|2185347... gi\|195991165, gi... - gi\|196036190\|ref\|ZP_03103589.1\| spore germination protein GerPC [Bacillus cereus W], gi\|195991165\|gb... gi\|228944855, gi... - gi\|228944855\|ref\|ZP_04107218.1\| spore germination protein gerPC [Bacillus thuringiensis serovar mont... gi\|228833382, gi... - gi\|228926285\|ref\|ZP_04089359.1\| spore germination protein gerPC [Bacillus thuringiensis serovar pond... gi\|228845761, gi... - gi\|228913822\|ref\|ZP_04077447.1\| spore germination protein gerPC [Bacillus thuringiensis serovar puls... gi\|229090189, gi... - gi\|229090189\|ref\|ZP_04221437.1\| spore germination protein gerPC [Bacillus cereus Rock3-42], gi\|22869...	6.0E-85	[1..204]	[1..204]
gi\|47555801, gi\|... - gi\|47567606\|ref\|ZP_00238317.1\| spore germination protein PC [Bacillus cereus G9241], gi\|47555801\|gb\|...	2.0E-84	[1..204]	[1..204]
gi\|229126555, gi... - gi\|229126555\|ref\|ZP_04255569.1\| spore germination protein gerPC [Bacillus cereus BDRD-Cer4], gi\|2286... gi\|229108704, gi... - gi\|229108704\|ref\|ZP_04238314.1\| spore germination protein gerPC [Bacillus cereus Rock1-15], gi\|22867... gi\|228704856, gi... - gi\|229078434\|ref\|ZP_04210995.1\| spore germination protein gerPC [Bacillus cereus Rock4-2], gi\|228704... gi\|228714309, gi... - gi\|229068801\|ref\|ZP_04202097.1\| spore germination protein gerPC [Bacillus cereus F65185], gi\|2287143... gi\|29894841, gi\|... - gi\|30019298\|ref\|NP_830929.1\| spore germination protein PC [Bacillus cereus ATCC 14579], gi\|29894841\|... gi\|228634091, gi... - gi\|229149449\|ref\|ZP_04277685.1\| spore germination protein gerPC [Bacillus cereus m1550], gi\|22863409... gi\|229143852, gi... - gi\|229143852\|ref\|ZP_04272271.1\| spore germination protein gerPC [Bacillus cereus BDRD-ST24], gi\|2286... gi\|206736926, gi... - gi\|206968006\|ref\|ZP_03228962.1\| spore germination protein GerPC [Bacillus cereus AH1134], gi\|2067369... gi\|218158810, gi... - gi\|218230853\|ref\|YP_002365931.1\| spore germination protein GerPC [Bacillus cereus B4264], gi\|2181588... gi\|229042988, gi... - gi\|229042988\|ref\|ZP_04190719.1\| spore germination protein gerPC [Bacillus cereus AH676], gi\|22872632... gi\|228802108, gi... - gi\|228957516\|ref\|ZP_04119268.1\| spore germination protein gerPC [Bacillus thuringiensis serovar paki... gi\|228919967, gi... - gi\|228919967\|ref\|ZP_04083321.1\| spore germination protein gerPC [Bacillus thuringiensis serovar huaz...	9.0E-83	[1..204]	[1..204]
GERPC_BACCE - Probable spore germination protein GerPC OS=Bacillus cereus GN=gerPC PE=1 SV=1 gi\|229189336, gi... - gi\|229189336\|ref\|ZP_04316356.1\| spore germination protein gerPC [Bacillus cereus ATCC 10876], gi\|228...	6.0E-82	[1..204]	[1..204]
gi\|89156474, gi\|... - gi\|89205680\|ref\|ZP_01184248.1\| spore germination protein PC [Bacillus weihenstephanensis KBAB4], gi\|...	8.0E-82	[1..204]	[1..204]
gi\|221318155 - gi\|221318155\|ref\|ZP_03599449.1\| spore germination protein [Bacillus subtilis subsp. subtilis str. JH... gi\|221313232 - gi\|221313232\|ref\|ZP_03595037.1\| spore germination protein [Bacillus subtilis subsp. subtilis str. NC... gi\|221322430 - gi\|221322430\|ref\|ZP_03603724.1\| spore germination protein [Bacillus subtilis subsp. subtilis str. SM... GERPC_BACSU - Probable spore germination protein GerPC OS=Bacillus subtilis (strain 168) GN=gerPC PE=1 SV=1 GEPC_BACSU, GERP... - Probable spore germination protein gerPC OS=Bacillus subtilis GN=gerPC PE=1 SV=1, (O06719) Probable ...	3.0E-70	[2..202]	[3..200]
gi\|89201753, gi\|... - gi\|89201753\|ref\|ZP_01180489.1\| gerPC; spore germination protein PC [Bacillus cereus subsp. cytotoxis...	6.0E-68	[1..204]	[1..206]
gi\|74492334, gi\|... - gi\|75760170\|ref\|ZP_00740228.1\| Spore germination protein PC [Bacillus thuringiensis serovar israelen...	2.0E-51	[1..148]	[1..149]

Back

Predicted Domain #1

Region A:
Residues: [1-204]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQDIYTYLH QLQQALQVQQ ATILNLEDQV RQLQEELNEL KNRPSSSIGK VEYKFDQLKV  60
   61 ENLNGTLNIG LNPFSTKEQQ IEDFQVDTET LKVNPETDTN PDFYQGILQE MHRYLDEEAY 120
  121 NRILHFEKEE RTPLDEMYRQ MMVDDIKKQM EHRLPYYLSQ AQSYEGTSTD PDYLRDIIIQ 180
  181 AMKHDIDKAF LSFIQHIPGN FRKE

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits